RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 TMEM99Q8N816 258 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 LSM14AQ8ND56 463 aaKnown RBP14.25□□□□□ -0.13
MCF2L-217ENST00000441756 OR10D3Q8NH80 312 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 RFKQ969G6 155 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 RELTQ969Z4 430 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 SARAFQ96BY9 339 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 OXGR1Q96P68 337 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 IL4I1Q96RQ9 567 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 ENKD1Q9H0I2 346 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 TXNIPQ9H3M7 391 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 SCN3BQ9NY72 215 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 ZNF226Q9NYT6 803 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 LIPGQ9Y5X9 500 aa14.25□□□□□ -0.13
MCF2L-217ENST00000441756 A0A1B0GVC2 190 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 MAGEA13PA6NCF6 341 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 PRR23D1E9PI22 279 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 TLX2O43763 284 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 AKAP8O43823 692 aaKnown RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 CXCL13O43927 109 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 PRKYO43930 277 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 PRR23D2P0DMB1 279 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 CPN1P15169 458 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 CLDN15P56746 228 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 RPL27P61353 136 aaKnown RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 H3F3AP84243 136 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 HSF1Q00613 529 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 POU3F1Q03052 451 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 C19orf57Q0VDD7 668 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 KRR1Q13601 381 aaKnown RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 LINC00303Q3SY05 128 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 PLEKHN1Q494U1 663 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 KCTD21Q4G0X4 260 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 SLC35F1Q5T1Q4 408 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 CXXC5Q7LFL8 322 aaKnown RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 FAM122BQ7Z309 247 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 LSRQ86X29 649 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 CNIH3Q8TBE1 160 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 ZNF566Q969W8 418 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 LRR1Q96L50 414 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 SNX18Q96RF0 628 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 SF3B5Q9BWJ5 86 aaKnown RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 H2AFY2Q9P0M6 372 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 SEC14L4Q9UDX3 406 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 MCTS1Q9ULC4 181 aaKnown RBP14.24□□□□□ -0.13
MCF2L-217ENST00000441756 TPRKBQ9Y3C4 175 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 ADAM18Q9Y3Q7 739 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 CNTRLQ7Z7A1 2325 aa14.24□□□□□ -0.13
MCF2L-217ENST00000441756 NCOR2Q9Y618 2525 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 TEX13CA0A0J9YWL9 993 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 OR14I1A6ND48 311 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 MS4A18H0YCH9 400 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 M0R129 80 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 SERPINI2O75830 405 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 BCL10O95999 233 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 RENP00797 406 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 NR2C1P13056 603 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 ZNF43P17038 809 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 GABRB1P18505 474 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 ACVR2AP27037 513 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 EFNB1P98172 346 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.23□□□□□ -0.13
MCF2L-217ENST00000441756 POU4F3Q15319 338 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 ACKR1Q16570 336 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 MS4A18Q3C1V0 323 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 SLC35D2Q76EJ3 337 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 GPAT4Q86UL3 456 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 SIAH3Q8IW03 269 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 ARIH2OSQ8N7S6 290 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 TEX19Q8NA77 164 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 OR52E2Q8NGJ4 325 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 TAAR6Q96RI8 345 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 ZNF71Q9NQZ8 489 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-217ENST00000441756 PLSCR2Q9NRY7 297 aa14.23□□□□□ -0.13
MCF2L-217ENST00000441756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.23□□□□□ -0.13
MCF2L-217ENST00000441756 IRGMA1A4Y4 181 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 KDM4EB2RXH2 506 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-217ENST00000441756 NPIPA2E9PIF3 369 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 NPIPA3F8WFD2 350 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 SLC1A7O00341 560 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 PRODHO43272 600 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 FAM20BO75063 409 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 WBP4O75554 376 aaKnown RBP14.22□□□□□ -0.13
MCF2L-217ENST00000441756 PLGP00747 810 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-217ENST00000441756 RPSAP08865 295 aaKnown RBP14.22□□□□□ -0.13
MCF2L-217ENST00000441756 FCGR2AP12318 317 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 HIST1H1CP16403 213 aaKnown RBP14.22□□□□□ -0.13
MCF2L-217ENST00000441756 P2RY4P51582 365 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 SUCLG1P53597 346 aaKnown RBP14.22□□□□□ -0.13
MCF2L-217ENST00000441756 MLLT10P55197 1068 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 GABARAPL2P60520 117 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 SRYQ05066 204 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 LGALS3BPQ08380 585 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 CRMP1Q14194 572 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 SF3B4Q15427 424 aaKnown RBP eCLIP14.22□□□□□ -0.136e-15■■■□□ 19
MCF2L-217ENST00000441756 NADK2Q4G0N4 442 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 KRTCAP3Q53RY4 240 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 NXNL2Q5VZ03 156 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 ABLIM2Q6H8Q1 611 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 CCDC103Q8IW40 242 aa14.22□□□□□ -0.13
MCF2L-217ENST00000441756 GHDCQ8N2G8 530 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms