RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SLC5A8Q8N695 610 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 OR4F15Q8NGB8 312 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 OR10G3Q8NGC4 313 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 TMEM163Q8TC26 289 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 PPP1R13LQ8WUF5 828 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 NAT6Q93015 286 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 ZFP3Q96NJ6 502 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 RANGRFQ9HD47 186 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 SLC2A9Q9NRM0 540 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 SLC6A5Q9Y345 797 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 I3L4J1 428 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 TP53I11O14683 189 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 SYNGR3O43761 229 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 CA11O75493 328 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 CLDN7O95471 211 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 CBLP22681 906 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 IFNGR2P38484 337 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 DDOSTP39656 456 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 PRTGQ2VWP7 1150 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 NKAPLQ5M9Q1 402 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 OGFOD2Q6N063 350 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 NLRX1Q86UT6 975 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 CARM1Q86X55 608 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 CBWD2Q8IUF1 395 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 MFSD6LQ8IWD5 586 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 LAX1Q8IWV1 398 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 C9orf62Q8N4C0 152 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 DHRSXQ8N5I4 330 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 TMEM251Q8N6I4 163 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 SOCS4Q8WXH5 440 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 C12orf43Q96C57 262 aaKnown RBP9.58□□□□□ -0.88
SYNE2-206ENST00000441438 SCARF2Q96GP6 870 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-206ENST00000441438 LRRC3BQ96PB8 259 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 PHB2Q99623 299 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 TPT1P8Q9HAU6 139 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 ZBTB26Q9HCK0 441 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 CLEC1BQ9P126 229 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 MEIOCA2RUB1 952 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 M0QZ24 198 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 TCF21O43680 179 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 FKBP6O75344 327 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 NKX2-2O95096 273 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 C1QTNF9P0C862 333 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 NR2F6P10588 404 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 ASCL1P50553 236 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 TAS2R41P59536 307 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 TWF1Q12792 350 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 BIKQ13323 160 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 COL28A1Q2UY09 1125 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 ZNF528Q3MIS6 628 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 LRRC8EQ6NSJ5 796 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 NIPAL3Q6P499 406 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 ZNF655Q8N720 491 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-206ENST00000441438 OR5AK3PQ8NH89 298 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 SPATA22Q8NHS9 363 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 LMO3Q8TAP4 145 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 FEZF2Q8TBJ5 459 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 DMAC2Q9NW81 257 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 ANKRD10Q9NXR5 420 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 BFARQ9NZS9 450 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 CD84Q9UIB8 345 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 ZNF391Q9UJN7 358 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 NEU3Q9UQ49 428 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 BAIAP2Q9UQB8 552 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 LAMA3Q16787 3333 aa9.58□□□□□ -0.88
SYNE2-206ENST00000441438 NPIPA5A0A0B4J1W7 369 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 A0A1B0GTW7 788 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 CYB5BO43169 146 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 ATXN1LP0C7T5 689 aaKnown RBP9.57□□□□□ -0.88
SYNE2-206ENST00000441438 SDHBP21912 280 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 RPA3P35244 121 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-206ENST00000441438 TESK1Q15569 626 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 PABPC1L2AQ5JQF8 200 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 PPM1JQ5JR12 505 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 REP15Q6BDI9 236 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 DHDDSQ86SQ9 333 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 TMEM25Q86YD3 366 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 LGALS14Q8TCE9 139 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 SNAPC3Q92966 411 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 BARHL1Q9BZE3 327 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 R3HDMLQ9H3Y0 253 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 NLE1Q9NVX2 485 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-206ENST00000441438 YLPM1P49750 1951 aaKnown RBP9.57□□□□□ -0.88
SYNE2-206ENST00000441438 KCNK1O00180 336 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 CLDN9O95484 217 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 RPLP0P05388 317 aaKnown RBP9.57□□□□□ -0.88
SYNE2-206ENST00000441438 MYOGP15173 224 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 CCKBRP32239 447 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 TTPAP49638 278 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 CYP51A1Q16850 503 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 ZNF774Q6NX45 483 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 UNQ9370/PRO34162Q6UXP9 181 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 SLC47A2Q86VL8 602 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 COMMD7Q86VX2 200 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 OR5L1Q8NGL2 311 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 ASB17Q8WXJ9 295 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 RPL10LQ96L21 214 aaKnown RBP9.57□□□□□ -0.88
SYNE2-206ENST00000441438 ATF6BQ99941 703 aa9.57□□□□□ -0.88
SYNE2-206ENST00000441438 MS4A7Q9GZW8 240 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-206ENST00000441438 EXOC1LA0A1B0GW35 172 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms