RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 RFX4Q33E94 735 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 FRMPD2BQ6IN97 320 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 ENPP6Q6UWR7 440 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 ZNF621Q6ZSS3 439 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 C6orf120Q7Z4R8 191 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 FAM83FQ8NEG4 500 aaPredicted RBP3.07□□□□□ -1.92
PFDN4-202ENST00000441080 OR10G9Q8NGN4 311 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 DTX3LQ8TDB6 740 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 SLC41A3Q96GZ6 507 aa3.07□□□□□ -1.92
PFDN4-202ENST00000441080 STOX2Q9P2F5 926 aaPredicted RBP3.07□□□□□ -1.92
PFDN4-202ENST00000441080 PHF3Q92576 2039 aaKnown RBP3.07□□□□□ -1.92
PFDN4-202ENST00000441080 KIR2DL5BA0A0G2JN68 375 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 KIR2DL5BA0A0G2JPC4 375 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 LAD1O00515 517 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 CAPN1P07384 714 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 PLEKP08567 350 aaPredicted RBP3.06□□□□□ -1.92
PFDN4-202ENST00000441080 ARFIP1P53367 373 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 ERVK-25P63136 954 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 PDIA2Q13087 525 aaKnown RBP3.06□□□□□ -1.92
PFDN4-202ENST00000441080 CHIT1Q13231 466 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 GGTLC2Q14390 218 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 PIGGQ5H8A4 983 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 TFDP3Q5H9I0 405 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 MAP3K15Q6ZN16 1313 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 TRIM69Q86WT6 500 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 KIR2DL5AQ8N109 375 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 LRRC75A-AS1Q8N1F1 130 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 TRPV1Q8NER1 839 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 OR4F15Q8NGB8 312 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 OR1N2Q8NGR9 330 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 KIR2DL5BQ8NHK3 375 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 PYROXD1Q8WU10 500 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 FGF14Q92915 247 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.06□□□□□ -1.92
PFDN4-202ENST00000441080 PSKH2Q96QS6 385 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 CCT7Q99832 543 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 CRACR2AQ9BSW2 395 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 AZI2Q9H6S1 392 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 LY9Q9HBG7 655 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 CALYQ9NYX4 217 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 GNPTGQ9UJJ9 305 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 PIGLQ9Y2B2 252 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 HEBP2Q9Y5Z4 205 aa3.06□□□□□ -1.92
PFDN4-202ENST00000441080 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.05□□□□□ -1.92
PFDN4-202ENST00000441080 SLC31A2O15432 143 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 SNAI2O43623 268 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 TIMM8AO60220 97 aaPredicted RBP3.05□□□□□ -1.92
PFDN4-202ENST00000441080 ALDOBP05062 364 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 RPS2P15880 293 aaKnown RBP3.05□□□□□ -1.92
PFDN4-202ENST00000441080 NMUP48645 174 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 CEBPDP49716 269 aaPredicted RBP3.05□□□□□ -1.92
PFDN4-202ENST00000441080 SUCLG1P53597 346 aaKnown RBP3.05□□□□□ -1.92
PFDN4-202ENST00000441080 AIF1P55008 147 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 HERVK_113P61574 105 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 REG3AQ06141 175 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 SCRN3Q0VDG4 424 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 TSPO2Q5TGU0 170 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 UQCC3Q6UW78 93 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 RGS9BPQ6ZS82 235 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 LINC01551Q86U37 167 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 DUSP18Q8NEJ0 188 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 MCOLN3Q8TDD5 553 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 SLC39A3Q9BRY0 314 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 TRIM62Q9BVG3 475 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 SLC17A9Q9BYT1 436 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 PPA2Q9H2U2 334 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 ZFP14Q9HCL3 533 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 MRPL47Q9HD33 250 aaKnown RBP3.05□□□□□ -1.92
PFDN4-202ENST00000441080 NACAE9PAV3 2078 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 FRMPD3Q5JV73 1810 aa3.05□□□□□ -1.92
PFDN4-202ENST00000441080 A0A1B0GVL5 298 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 SNTNA6NMZ2 147 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 DFNA5O60443 496 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 TSPAN12O95859 305 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 IL1BP01584 269 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 HOXA9P31269 272 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 CRISP3P54108 245 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 ACTR1AP61163 376 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 OGDHQ02218 1023 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 PAX5Q02548 391 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 EBI3Q14213 229 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 GNMTQ14749 295 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 DGUOKQ16854 277 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 LCN12Q6JVE5 192 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 THOC6Q86W42 341 aaKnown RBP3.04□□□□□ -1.92
PFDN4-202ENST00000441080 PIANPQ8IYJ0 282 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 ARL6IP6Q8N6S5 226 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 FAM110BQ8TC76 370 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 SMARCD2Q92925 531 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 STARD4Q96DR4 205 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 ECSITQ9BQ95 431 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 NMRAL1Q9HBL8 299 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 DMAP1Q9NPF5 467 aaPredicted RBP3.04□□□□□ -1.92
PFDN4-202ENST00000441080 ZNF226Q9NYT6 803 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 N6AMT1Q9Y5N5 214 aa3.04□□□□□ -1.92
PFDN4-202ENST00000441080 ASTN1O14525 1302 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 IGLV4-69A0A075B6H9 119 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 RSPH10B2B2RC85 870 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 ANKRD63C9JTQ0 380 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms