RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PMS2P3Q13401 168 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 TNK1Q13470 666 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 PIK3C3Q8NEB9 887 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 SH3GL1Q99961 368 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 RSPO3Q9BXY4 272 aaPredicted RBP17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 LINC00470Q9BZP3 86 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 KAT8Q9H7Z6 458 aaKnown RBP17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 ZANQ9Y493 2812 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 RNF223E7ERA6 249 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 FMO6PO60774 539 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 SERPINI2O75830 405 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 IGHV4-39P01824 125 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 CAPZA2P47755 286 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 PPP2R2BQ00005 443 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 POU3F1Q03052 451 aaPredicted RBP17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 CARD17Q5XLA6 110 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 ZNF544Q6NX49 715 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 ANKRD16Q6P6B7 361 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 ZNF613Q6PF04 617 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 B3GLCTQ6Y288 498 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 SCAIQ8N9R8 606 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 ADPRHL1Q8NDY3 354 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 RASSF5Q8WWW0 418 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 ARHGDIGQ99819 225 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 ECSITQ9BQ95 431 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 MOV10Q9HCE1 1003 aaKnown RBP17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 B3GAT1Q9P2W7 334 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 GDF2Q9UK05 429 aaPredicted RBP17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 MOKQ9UQ07 419 aa17.36■□□□□ 0.37
SHROOM1-204ENST00000440118 BBIP1A8MTZ0 92 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 MRASO14807 208 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 CHP2O43745 196 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 SSX4O60224 188 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 OR6A2O95222 327 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 CD8AP01732 235 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 CRYAAP02489 173 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 C8BP07358 591 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 AHCYP23526 432 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 PAX7P23759 505 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 PCSK6P29122 969 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 TUBA1BP68363 451 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 TUBA4AP68366 448 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 CHRNB3Q05901 458 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 DUSP7Q16829 419 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 TUBA1AQ71U36 451 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 OR6S1Q8NH40 331 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 PROX1Q92786 737 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 ZNF317Q96PQ6 595 aaPredicted RBP17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 SLC38A2Q96QD8 506 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 TMEM43Q9BTV4 400 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 GRIP2Q9C0E4 1043 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 B3GAT2Q9NPZ5 323 aa17.35■□□□□ 0.37
SHROOM1-204ENST00000440118 M0R3G1 203 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 KPNA4O00629 521 aaPredicted RBP17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 TRAF3IP2O43734 574 aaPredicted RBP17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 NDUFS7O75251 213 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 CD247P20963 164 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 PUDPQ08623 228 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 RAB35Q15286 201 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 VMACQ2NL98 169 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 CEACAM16Q2WEN9 425 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 ENTPD8Q5MY95 495 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 REP15Q6BDI9 236 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 TTC33Q6PID6 262 aaPredicted RBP17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 LINGO2Q7L985 606 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 OR6T1Q8NGN1 323 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 TAMM41Q96BW9 452 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 LRRC58Q96CX6 371 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 OR2M2Q96R28 347 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 WFDC6Q9BQY6 131 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 CRLF2Q9HC73 371 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 NOX1Q9Y5S8 564 aa17.34■□□□□ 0.37
SHROOM1-204ENST00000440118 ALPK2Q86TB3 2170 aa17.33■□□□□ 0.37
SHROOM1-204ENST00000440118 ARPC4-TTLL3A0A0A6YYG9 625 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 ZNF726A6NNF4 738 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 FBP2O00757 339 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 TPST2O60704 377 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 ZNF432O94892 652 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 MT-ATP6P00846 226 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 BGLAPP02818 100 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 TP53P04637 393 aaPredicted RBP17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 ARF1P84077 181 aaKnown RBP17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 KLF10Q13118 480 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 RABL3Q5HYI8 236 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 COQ5Q5HYK3 327 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 NANOGP8Q6NSW7 305 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 CLEC2AQ6UVW9 174 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 SNX32Q86XE0 403 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 PCYOX1LQ8NBM8 494 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 MAPK1IP1LQ8NDC0 245 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 GPR32P1Q8NGA4 272 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 OR8J3Q8NGG0 315 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 OR6N1Q8NGY5 312 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 ADAMTS16Q8TE57 1224 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 BCL2L2Q92843 193 aaPredicted RBP17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 MOGAT1Q96PD6 335 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 RHNO1Q9BSD3 238 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 NANOGQ9H9S0 305 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 GPR35Q9HC97 309 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 MRPL39Q9NYK5 338 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms