RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 BSPH1Q075Z2 132 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 ZNF74Q16587 644 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 LINGO2Q7L985 606 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 NKAIN4Q8IVV8 208 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 UEVLDQ8IX04 471 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 WDR31Q8NA23 367 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 LZICQ8WZA0 190 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 ALKBH3Q96Q83 286 aaPredicted RBP20.76■□□□□ 0.91
VARS-217ENST00000440048 LRRC37BQ96QE4 947 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 ALPK1Q96QP1 1244 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 LINC00470Q9BZP3 86 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 SLC19A3Q9BZV2 496 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 RNF115Q9Y4L5 304 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 ZNF587BE7ETH6 402 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 DCTN3O75935 186 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 CDH2P19022 906 aaPredicted RBP20.75■□□□□ 0.91
VARS-217ENST00000440048 PUDPQ08623 228 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 NHLRC1Q6VVB1 395 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 C20orf204Q6ZNR8 217 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 VTCN1Q7Z7D3 282 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 OR5J2Q8NH18 312 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 CCT8L2Q96SF2 557 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 FKRPQ9H9S5 495 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 SPAG4Q9NPE6 437 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 MEPEQ9NQ76 525 aaPredicted RBP20.75■□□□□ 0.91
VARS-217ENST00000440048 SLC17A5Q9NRA2 495 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 ARL8BQ9NVJ2 186 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 ARID1AO14497 2285 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 ACANP16112 2415 aa20.75■□□□□ 0.91
VARS-217ENST00000440048 CLOCKO15516 846 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 SLC43A1O75387 559 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 ZNF682O95780 498 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 POU3F1Q03052 451 aaPredicted RBP20.74■□□□□ 0.91
VARS-217ENST00000440048 CBLL1Q75N03 491 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 C17orf78Q8N4C9 275 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 LILRB1Q8NHL6 650 aaPredicted RBP20.74■□□□□ 0.91
VARS-217ENST00000440048 AKAP1Q92667 903 aaKnown RBP eCLIP20.74■□□□□ 0.91
VARS-217ENST00000440048 OR2M2Q96R28 347 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 NANSQ9NR45 359 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 BEX4Q9NWD9 120 aaPredicted RBP20.74■□□□□ 0.91
VARS-217ENST00000440048 ADA2Q9NZK5 511 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 TAGLN3Q9UI15 199 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 NOX1Q9Y5S8 564 aa20.74■□□□□ 0.91
VARS-217ENST00000440048 HEATR1Q9H583 2144 aaKnown RBP20.74■□□□□ 0.91
VARS-217ENST00000440048 FLNAP21333 2647 aaKnown RBP20.74■□□□□ 0.91
VARS-217ENST00000440048 HS3ST1O14792 307 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 AKAP8O43823 692 aaKnown RBP20.73■□□□□ 0.91
VARS-217ENST00000440048 SERPINA1P01009 418 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 ADORA3P0DMS8 318 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 THRBP10828 461 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 NCK1P16333 377 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 AHCYP23526 432 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 RBM34P42696 430 aaKnown RBP20.73■□□□□ 0.91
VARS-217ENST00000440048 ZNF83P51522 516 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 UGT2B15P54855 530 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 FOXD4Q12950 439 aaPredicted RBP20.73■□□□□ 0.91
VARS-217ENST00000440048 PXKQ7Z7A4 578 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 TMEM123Q8N131 208 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 LRRC17Q8N6Y2 441 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 ANKS4BQ8N8V4 417 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 TMEM255BQ8WV15 326 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 TXNDC15Q96J42 360 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 CCL19Q99731 98 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 A4GNTQ9UNA3 340 aa20.73■□□□□ 0.91
VARS-217ENST00000440048 C11orf98E9PRG8 122 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 OR6A2O95222 327 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 SLC25A3Q00325 362 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 ROR2Q01974 943 aaKnown RBP20.72■□□□□ 0.91
VARS-217ENST00000440048 HIKESHIQ53FT3 197 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 HMBOX1Q6NT76 420 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 ADAM5Q6NVV9 412 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 SLC46A3Q7Z3Q1 461 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 OR1K1Q8NGR3 316 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 PFN4Q8NHR9 129 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 TMEM239Q8WW34 195 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 GEMIN6Q8WXD5 167 aaKnown RBP20.72■□□□□ 0.91
VARS-217ENST00000440048 NEUROG1Q92886 237 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 PIGTQ969N2 578 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 FAM162AQ96A26 154 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 BOD1Q96IK1 185 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 PRRC1Q96M27 445 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 PIP5K1AQ99755 562 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 EMC6Q9BV81 110 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 C1QTNF6Q9BXI9 259 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 MED29Q9NX70 200 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 EGFL7Q9UHF1 273 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 ZNF229Q9UJW7 825 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 AMDHD2Q9Y303 409 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 SNX13Q9Y5W8 968 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 PLCE1Q9P212 2302 aa20.72■□□□□ 0.91
VARS-217ENST00000440048 RPL36A-HNRNPH2H7BZ11 118 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 MT-ND1P03886 318 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 HIST1H2ABP04908 130 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 IFNW1P05000 195 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 ASAH2BP0C7U1 165 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 HOXC12P31275 282 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 YAP1P46937 504 aaKnown RBP20.71■□□□□ 0.91
VARS-217ENST00000440048 ZP4Q12836 540 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 IFI44LQ53G44 452 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 HIST3H2AQ7L7L0 130 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms