RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CENPBD1B2RD01 187 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 BHLHE40O14503 412 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 IMPA2O14732 288 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PLPP2O43688 288 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SOX14O95416 240 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 KRT8P05787 483 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ADRA2AP08913 450 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RAB40ALP0C0E4 278 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MSL3P1P0C860 447 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 IL7P13232 177 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 BMP7P18075 431 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PAICSP22234 425 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ADH7P40394 386 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RAG2P55895 527 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SCAND1P57086 179 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR2B6P58173 313 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 BTG1P62324 171 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ACTA2P62736 377 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ACTG2P63267 376 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 GALEQ14376 348 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF141Q15928 474 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF79Q15937 498 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CCDC58Q4VC31 144 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 DCST2Q5T1A1 773 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PDZK1Q5T2W1 519 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 NIPAL3Q6P499 406 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 FAM111BQ6SJ93 734 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF322Q6U7Q0 402 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PLXDC2Q6UX71 529 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 LINC00114Q6XXX2 140 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 NANOGNBQ7Z5D8 188 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 HMGN2P46Q86SG4 172 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RBM45Q8IUH3 476 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR9A2Q8NGT5 310 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 GRHL3Q8TE85 626 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 LIPHQ8WWY8 451 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 HPS1Q92902 700 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 DNAJA3Q96EY1 480 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MNTQ99583 582 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PRSS27Q9BQR3 290 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 YIPF4Q9BSR8 244 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 KATNB1Q9BVA0 655 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZCCHC4Q9H5U6 513 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TMEM27Q9HBJ8 222 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ADAP2Q9NPF8 381 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 LRFN1Q9P244 771 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF221Q9UK13 617 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OSGIN2Q9Y236 505 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLC35A3Q9Y2D2 325 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLC6A5Q9Y345 797 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MED31Q9Y3C7 131 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CHST2Q9Y4C5 530 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 NPFFR2Q9Y5X5 522 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PRR14LQ5THK1 2151 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 H0YIG0 161 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF354AO60765 605 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ATP6V1G1O75348 118 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 GATBO75879 557 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CDRT1O95170 752 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 APEHP13798 732 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLC6A6P31641 620 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 EVX1P49640 407 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 GPR143P51810 404 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SOX8P57073 446 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 POU6F2P78424 691 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF155Q12901 538 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SNTB1Q13884 538 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR1C1Q15619 314 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNHIT3Q15649 155 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PRICKLE4Q2TBC4 344 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 HBMQ6B0K9 141 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CXXC5Q7LFL8 322 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 COMTD1Q86VU5 262 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RPS19BP1Q86WX3 136 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 LRRC28Q86X40 367 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF595Q8IYB9 648 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TCTE3Q8IZS6 198 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ARHGEF39Q8N4T4 335 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 Q8NA96 180 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR7G2Q8NG99 324 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR8D4Q8NGM9 314 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR4Q3Q8NH05 313 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RPS4Y2Q8TD47 263 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 C15orf40Q8WUR7 153 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TMEM239Q8WW34 195 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PSMF1Q92530 271 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OTULINQ96BN8 352 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF285Q96NJ3 590 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 DGAT2Q96PD7 388 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 GPX7Q96SL4 187 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 KCNJ15Q99712 375 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 G6PC3Q9BUM1 346 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 DEFB127Q9H1M4 99 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 UBQLN3Q9H347 655 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PPP1R3EQ9H7J1 279 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 WDR54Q9H977 334 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 EXOSC4Q9NPD3 245 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RPRD1BQ9NQG5 326 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms