RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TRAP1Q12931 704 aaKnown RBP10.43□□□□□ -0.74
HSPG2-206ENST00000439717 BNIP1Q12981 228 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 DGCR6Q14129 220 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 TSPO2Q5TGU0 170 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 NIPAL3Q6P499 406 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 MBOAT2Q6ZWT7 520 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 BHLHA15Q7RTS1 189 aaPredicted RBP10.43□□□□□ -0.74
HSPG2-206ENST00000439717 SLC46A3Q7Z3Q1 461 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 P2RY8Q86VZ1 359 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 DHFR2Q86XF0 187 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 ZNF433Q8N7K0 673 aaPredicted RBP10.43□□□□□ -0.74
HSPG2-206ENST00000439717 ANKK1Q8NFD2 765 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 HSD17B8Q92506 261 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 SLC7A6OSQ96CW6 309 aaPredicted RBP10.43□□□□□ -0.74
HSPG2-206ENST00000439717 ASB9Q96DX5 294 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 PIP5K1AQ99755 562 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 BTBD10Q9BSF8 475 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 THTPAQ9BU02 230 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 LINC00470Q9BZP3 86 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 RASSF1Q9NS23 344 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 SLC7A10Q9NS82 523 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 TAS2R5Q9NYW4 299 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 RHCGQ9UBD6 479 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 CENPEQ02224 2701 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 DCHS2Q6V1P9 2916 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 hCG_2039718K7EN88 272 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 SLC43A1O75387 559 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 LYZL6O75951 148 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 ZNF432O94892 652 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 FABP3P05413 133 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 ATP6V1B2P21281 511 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 AHCYP23526 432 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 MPGP29372 298 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 SELENOPP49908 381 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 SMIM11AP58511 58 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 MS4A2Q01362 244 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 POU3F1Q03052 451 aaPredicted RBP10.42□□□□□ -0.74
HSPG2-206ENST00000439717 TGFBR3Q03167 851 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 PRKCDQ05655 676 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 IQCCQ4KMZ1 466 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 C1QTNF12Q5T7M4 302 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 ANKRD34AQ69YU3 496 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 OR7E24Q6IFN5 339 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 NHLRC1Q6VVB1 395 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 CYP2R1Q6VVX0 501 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 ZNF730Q6ZMV8 503 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 NANOGNBQ7Z5D8 188 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 CDK20Q8IZL9 346 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 LRRC17Q8N6Y2 441 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 C1orf162Q8NEQ5 155 aaPredicted RBP10.42□□□□□ -0.74
HSPG2-206ENST00000439717 S100PBPQ96BU1 408 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 BPIFA2Q96DR5 249 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 DHRS1Q96LJ7 313 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 ZNF347Q96SE7 839 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 TRIM15Q9C019 465 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 MAGIXQ9H6Y5 334 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 IL1RAPQ9NPH3 570 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 C20orf141Q9NUB4 165 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 V9GYQ6 96 aa10.42□□□□□ -0.74
HSPG2-206ENST00000439717 PKDREJQ9NTG1 2253 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 A0A087WUU8 490 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 TCRBV5S2A0A599 114 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 CIB4A0PJX0 185 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 CYSRT1A8MQ03 144 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 ZNF587BE7ETH6 402 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 RNF13O43567 381 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 DNAJC8O75937 253 aaPredicted RBP10.41□□□□□ -0.74
HSPG2-206ENST00000439717 KRT33AO76009 404 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 THBDP07204 575 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 ITGA5P08648 1049 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 TSPAN19P0C672 248 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 IFI30P13284 250 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 HLA-DOBP13765 273 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 DNAJA1P31689 397 aaKnown RBP10.41□□□□□ -0.74
HSPG2-206ENST00000439717 FOXD4Q12950 439 aaPredicted RBP10.41□□□□□ -0.74
HSPG2-206ENST00000439717 TSC22D1Q15714 1073 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 ANKDD1AQ495B1 522 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 TIMM23BQ5SRD1 257 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 PGM2L1Q6PCE3 622 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 C22orf34Q6ZV56 151 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 RRM2BQ7LG56 351 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 PIWIL3Q7Z3Z3 882 aaKnown RBP10.41□□□□□ -0.74
HSPG2-206ENST00000439717 TMEM200AQ86VY9 491 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 NRMQ8IXM6 262 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 C17orf78Q8N4C9 275 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 SLC7A13Q8TCU3 470 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 ZC3HAV1LQ96H79 300 aaKnown RBP10.41□□□□□ -0.74
HSPG2-206ENST00000439717 BOD1Q96IK1 185 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 CLPTM1LQ96KA5 538 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 LRR1Q96L50 414 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 LRGUKQ96M69 825 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 ADAD1Q96M93 576 aaKnown RBP10.41□□□□□ -0.74
HSPG2-206ENST00000439717 MUS81Q96NY9 551 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 OR2M2Q96R28 347 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 NGBQ9NPG2 151 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 TMEM5Q9Y2B1 443 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 HIF3AQ9Y2N7 669 aa10.41□□□□□ -0.74
HSPG2-206ENST00000439717 ANKHD1Q8IWZ3 2542 aaKnown RBP10.41□□□□□ -0.74
HSPG2-206ENST00000439717 FBN2P35556 2912 aa10.4□□□□□ -0.74
HSPG2-206ENST00000439717 SLC35F4A4IF30 521 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms