RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CGREF1Q99674 301 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 IKZF5Q9H5V7 419 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 B3GAT2Q9NPZ5 323 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 KLHL14Q9P2G3 628 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 FBXO9Q9UK97 447 aaPredicted RBP16.42■□□□□ 0.22
CCDC78-204ENST00000439619 ABCA2Q9BZC7 2435 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 USF3Q68DE3 2245 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 NAV3Q8IVL0 2385 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 A0A0B4J2E0 115 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 A0A1B0GX12 115 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 TLX2O43763 284 aaPredicted RBP16.41■□□□□ 0.22
CCDC78-204ENST00000439619 FMO6PO60774 539 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 EDF1O60869 148 aaKnown RBP16.41■□□□□ 0.22
CCDC78-204ENST00000439619 MFN2O95140 757 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 C8BP07358 591 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 SLC25A16P16260 332 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 CBLP22681 906 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 EFNA4P52798 201 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 LGALS3BPQ08380 585 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 PMS2P3Q13401 168 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 ZNF613Q6PF04 617 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 PATL1Q86TB9 770 aaKnown RBP16.41■□□□□ 0.22
CCDC78-204ENST00000439619 LSRQ86X29 649 aaPredicted RBP16.41■□□□□ 0.22
CCDC78-204ENST00000439619 FAM169BQ8N8A8 192 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 TMEM43Q9BTV4 400 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 PRR14Q9BWN1 585 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 B3GAT1Q9P2W7 334 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 NOX1Q9Y5S8 564 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 FKBP7Q9Y680 259 aa16.41■□□□□ 0.22
CCDC78-204ENST00000439619 IGKV1D-42A0A075B6H8 117 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 IGHV1-18A0A0C4DH31 117 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 ZNF726A6NNF4 738 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 ZNF432O94892 652 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 OR6A2O95222 327 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 MT-ATP6P00846 226 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 MTPNP58546 118 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 ARF1P84077 181 aaKnown RBP16.4■□□□□ 0.22
CCDC78-204ENST00000439619 COMTD1Q86VU5 262 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 SMYD1Q8NB12 490 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 OR4F15Q8NGB8 312 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 RASSF5Q8WWW0 418 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 FAM168AQ92567 244 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 FBXO17Q96EF6 278 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 MCHR1Q99705 422 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 SH3GL1Q99961 368 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 CRLF2Q9HC73 371 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 GPR35Q9HC97 309 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 SEC14L4Q9UDX3 406 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 HIVEP2P31629 2446 aa16.4■□□□□ 0.22
CCDC78-204ENST00000439619 M0QX08 132 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 CD5LO43866 347 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 CRLF1O75462 422 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 TROVE2P10155 538 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCDC78-204ENST00000439619 AHCYP23526 432 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 ARR3P36575 388 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 SERPINF1P36955 418 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 CAPZA2P47755 286 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 CDH12P55289 794 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 PUDPQ08623 228 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 CYLC2Q14093 348 aaPredicted RBP16.39■□□□□ 0.21
CCDC78-204ENST00000439619 CEACAM16Q2WEN9 425 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 IL17RDQ8NFM7 739 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 OR10H5Q8NGA6 315 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 SLC41A3Q96GZ6 507 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 OR2M2Q96R28 347 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 CA10Q9NS85 328 aa16.39■□□□□ 0.21
CCDC78-204ENST00000439619 MRPL39Q9NYK5 338 aaKnown RBP16.39■□□□□ 0.21
CCDC78-204ENST00000439619 CRNNQ9UBG3 495 aaPredicted RBP16.39■□□□□ 0.21
CCDC78-204ENST00000439619 IGHV4-30-2A0A087WSY4 118 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 ZNF99A8MXY4 864 aaPredicted RBP16.38■□□□□ 0.21
CCDC78-204ENST00000439619 B9A039 149 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 M0R3G1 203 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 TRAF3IP2O43734 574 aaPredicted RBP16.38■□□□□ 0.21
CCDC78-204ENST00000439619 CHP2O43745 196 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 PDE5AO76074 875 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 CBR1P16152 277 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 PCBP3P57721 371 aaKnown RBP16.38■□□□□ 0.21
CCDC78-204ENST00000439619 NAAAQ02083 359 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 POU3F1Q03052 451 aaPredicted RBP16.38■□□□□ 0.21
CCDC78-204ENST00000439619 LINGO2Q7L985 606 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 SLC46A3Q7Z3Q1 461 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 PTOV1Q86YD1 416 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 OR6N1Q8NGY5 312 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 LRR1Q96L50 414 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 ARHGDIGQ99819 225 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 ZNF385DQ9H6B1 395 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 KAT8Q9H7Z6 458 aaKnown RBP16.38■□□□□ 0.21
CCDC78-204ENST00000439619 YAE1D1Q9NRH1 226 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 USP22Q9UPT9 525 aa16.38■□□□□ 0.21
CCDC78-204ENST00000439619 PRR14LQ5THK1 2151 aa16.37■□□□□ 0.21
CCDC78-204ENST00000439619 MS4A18H0YCH9 400 aa16.37■□□□□ 0.21
CCDC78-204ENST00000439619 M0R3H8 397 aa16.37■□□□□ 0.21
CCDC78-204ENST00000439619 F12P00748 615 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-204ENST00000439619 IGKV3-15P01624 115 aa16.37■□□□□ 0.21
CCDC78-204ENST00000439619 BGLAPP02818 100 aa16.37■□□□□ 0.21
CCDC78-204ENST00000439619 OPN1SWP03999 348 aa16.37■□□□□ 0.21
CCDC78-204ENST00000439619 ERCC1P07992 297 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-204ENST00000439619 CECR9P0C854 216 aa16.37■□□□□ 0.21
CCDC78-204ENST00000439619 H2AFXP16104 143 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-204ENST00000439619 PCGF2P35227 344 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms