RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 PLRG1O43660 514 aaKnown RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 FCMRO60667 390 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 SLC2A5P22732 501 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 SSR2P43308 183 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ART1P52961 327 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 HCCSP53701 268 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ACTC1P68032 377 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ACTA1P68133 377 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 REEP5Q00765 189 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 COL9A2Q14055 689 aaPredicted RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 TMEM69Q5SWH9 247 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 THSD4Q6ZMP0 1018 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PARS2Q7L3T8 475 aaKnown RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 TMEFF1Q8IYR6 380 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 CYB561A3Q8NBI2 242 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 OR2AK2Q8NG84 335 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 RAD51AP1Q96B01 352 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PRAP1Q96NZ9 151 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 GFI1Q99684 422 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 SEMA4CQ9C0C4 833 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ESRP2Q9H6T0 727 aaKnown RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 IL36AQ9UHA7 158 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 FBXL4Q9UKA2 621 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 MDC1Q14676 2089 aaKnown RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 IFITM5A6NNB3 132 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 KPNA3O00505 521 aaPredicted RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 OR1F1O43749 312 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ZNF217O75362 1048 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ELFN1P0C7U0 828 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 C8orf89P0DMQ9 161 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 RPA2P15927 270 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 C5AR1P21730 350 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 UBE2MP61081 183 aaKnown RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 PPP2CBP62714 309 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PPP2CAP67775 309 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 MRPS10P82664 201 aaKnown RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 FGL2Q14314 439 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 FAM46CQ5VWP2 391 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 DPPA4Q7L190 304 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PFN4Q8NHR9 129 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 SYNPRQ8TBG9 265 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PELI1Q96FA3 418 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 S100A16Q96FQ6 103 aaKnown RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 PRSS27Q9BQR3 290 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ZNF223Q9UK11 482 aaPredicted RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 COL27A1Q8IZC6 1860 aaPredicted RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 RIIAD1A6NNX1 92 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ACOT7O00154 380 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 EMC8O43402 210 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 POP7O75817 140 aaKnown RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 ADH1BP00325 375 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 GYPBP06028 91 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 SRMP19623 302 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PSMB5P28074 263 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PDX1P52945 283 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 CLDN12P56749 244 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PRR5P85299 388 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 SORDQ00796 357 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 CBFBQ13951 182 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 HFEQ30201 348 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 FAM74A1Q5RGS3 127 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ELP2Q6IA86 826 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ZNF793Q6ZN11 406 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 DEFB119Q8N690 84 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 LINC00469Q8N7U9 141 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 CAMKVQ8NCB2 501 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 NUP43Q8NFH3 380 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 OR8D1Q8WZ84 308 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 MOAP1Q96BY2 351 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 CNRIP1Q96F85 164 aaPredicted RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 SLC19A3Q9BZV2 496 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 SLC25A18Q9H1K4 315 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 BARX1Q9HBU1 254 aaPredicted RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 NOX4Q9NPH5 578 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 C20orf141Q9NUB4 165 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 POT1Q9NUX5 634 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 RASL12Q9NYN1 266 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 PILRBQ9UKJ0 227 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ERVK-19Q9WJR5 959 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 ZNF443Q9Y2A4 671 aaPredicted RBP7.84□□□□□ -1.15
HPS4-206ENST00000439453 SLC35A3Q9Y2D2 325 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 A0A1W2PS29 197 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 ZNF879B4DU55 563 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 ADAM11O75078 769 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 RCBTB2O95199 551 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 RLN1P04808 185 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 UBBP0CG47 229 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 UBCP0CG48 685 aaKnown RBP7.84□□□□□ -1.16
HPS4-206ENST00000439453 RPS27AP62979 156 aaKnown RBP7.84□□□□□ -1.16
HPS4-206ENST00000439453 UBA52P62987 128 aaKnown RBP7.84□□□□□ -1.16
HPS4-206ENST00000439453 SIRPAP78324 504 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 CRMP1Q14194 572 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 ZNF433Q8N7K0 673 aaPredicted RBP7.84□□□□□ -1.16
HPS4-206ENST00000439453 SLC2A12Q8TD20 617 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 CXorf40AQ8TE69 158 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 DNASE2BQ8WZ79 361 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 HDAC8Q9BY41 377 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 SMOC1Q9H4F8 434 aa7.84□□□□□ -1.16
HPS4-206ENST00000439453 HEATR5BQ9P2D3 2071 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 TRBV2A0A0J9YWF9 115 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms