RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 OR5M9Q8NGP3 310 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 MOSPD2Q8NHP6 518 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF845Q96IR2 970 aaPredicted RBP11.32□□□□□ -0.6
SCLT1-202ENST00000439369 SAMD8Q96LT4 415 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 ADAD1Q96M93 576 aaKnown RBP11.32□□□□□ -0.6
SCLT1-202ENST00000439369 MBOAT4Q96T53 435 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 PITX2Q99697 317 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 TSSK6Q9BXA6 273 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 PRRG4Q9BZD6 226 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 GRIP2Q9C0E4 1043 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 TOR3AQ9H497 397 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 EGLN3Q9H6Z9 239 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 BCO1Q9HAY6 547 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 B3GAT1Q9P2W7 334 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 TNFRSF10DQ9UBN6 386 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 SEC14L4Q9UDX3 406 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 RCE1Q9Y256 329 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 MBD3L4A6NDZ8 208 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-202ENST00000439369 MBD3L3A6NE82 208 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-202ENST00000439369 A6NIZ1 184 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 MBD3L5A6NJ08 208 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-202ENST00000439369 CENPBD1B2RD01 187 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF814B7Z6K7 855 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 BHLHE40O14503 412 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 AHCYL1O43865 530 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 SOX14O95416 240 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 SNAP29O95721 258 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 HMGN1P05114 100 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 MLLT10P55197 1068 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 CASP6P55212 293 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 CTXN1P60606 82 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 RAP1BP61224 184 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 RAP1AP62834 184 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 RASGEF1BQ0VAM2 473 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 IL18R1Q13478 541 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 KEAP1Q14145 624 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 PTGES3Q15185 160 aaKnown RBP11.31□□□□□ -0.6
SCLT1-202ENST00000439369 PGGHGQ32M88 737 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 EEF1A1P5Q5VTE0 462 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 SLX4IPQ5VYV7 408 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF585AQ6P3V2 769 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 IZUMO2Q6UXV1 221 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 NHLRC1Q6VVB1 395 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 ADCK1Q86TW2 530 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 MCEMP1Q8IX19 187 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 PIP4P2Q8N4L2 257 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 DHRSXQ8N5I4 330 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 GALNT11Q8NCW6 608 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF555Q8NEP9 628 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 OR9K2Q8NGE7 335 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 OR8D4Q8NGM9 314 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 MBD3L2Q8NHZ7 208 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-202ENST00000439369 FNDC9Q8TBE3 224 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 ROBO4Q8WZ75 1007 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 TMEM45BQ96B21 275 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 DNAJA3Q96EY1 480 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 GMPPAQ96IJ6 420 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-202ENST00000439369 HRASLS5Q96KN8 279 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 TRIB1Q96RU8 372 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 IFT27Q9BW83 186 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 PLA2G12AQ9BZM1 189 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 TXNIPQ9H3M7 391 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 RIBC2Q9H4K1 309 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 FAM118AQ9NWS6 357 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 PIEZO2Q9H5I5 2752 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 MPDZO75970 2070 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF407Q9C0G0 2248 aa11.31□□□□□ -0.6
SCLT1-202ENST00000439369 B8ZZF3 427 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 MCIDASD6RGH6 385 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 TRAF3IP2O43734 574 aaPredicted RBP11.3□□□□□ -0.6
SCLT1-202ENST00000439369 SS18L1O75177 396 aaPredicted RBP11.3□□□□□ -0.6
SCLT1-202ENST00000439369 AHCYP23526 432 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 POU1F1P28069 291 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 SDHAP31040 664 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 TIMP3P35625 211 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 CAPGP40121 348 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 AQP4P55087 323 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 RPL27P61353 136 aaKnown RBP11.3□□□□□ -0.6
SCLT1-202ENST00000439369 ADARB1P78563 741 aaKnown RBP11.3□□□□□ -0.6
SCLT1-202ENST00000439369 POU3F1Q03052 451 aaPredicted RBP11.3□□□□□ -0.6
SCLT1-202ENST00000439369 GINS1Q14691 196 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 C12orf73Q69YU5 71 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 B3GNT6Q6ZMB0 384 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 CREB3L2Q70SY1 520 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 FAM122BQ7Z309 247 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 GPAT4Q86UL3 456 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 DOLPP1Q86YN1 238 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 CCDC103Q8IW40 242 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 ARIH2OSQ8N7S6 290 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 RELTQ969Z4 430 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF570Q96NI8 536 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 SLC38A2Q96QD8 506 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 SNX18Q96RF0 628 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF184Q99676 751 aaPredicted RBP11.3□□□□□ -0.6
SCLT1-202ENST00000439369 ADI1Q9BV57 179 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 KATNB1Q9BVA0 655 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 POLDIP3Q9BY77 421 aaKnown RBP11.3□□□□□ -0.6
SCLT1-202ENST00000439369 ENKD1Q9H0I2 346 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms