RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 NAP1L6A6NFF2 107 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF879B4DU55 563 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 MCIDASD6RGH6 385 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 CDC123O75794 336 aaPredicted RBP12.4□□□□□ -0.42
PCNX3-202ENST00000439247 MPGP29372 298 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 EFNB2P52799 333 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 B2MP61769 119 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 ARHGAP19Q14CB8 494 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 ATXN7L3Q14CW9 347 aaPredicted RBP12.4□□□□□ -0.42
PCNX3-202ENST00000439247 AMZ1Q400G9 498 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 ZCCHC10Q8TBK6 192 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 ASB16Q96NS5 453 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 CNN2Q99439 309 aaKnown RBP12.4□□□□□ -0.42
PCNX3-202ENST00000439247 FLRT3Q9NZU0 649 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 OR10H1Q9Y4A9 318 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 HMSDA8MTL9 139 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 ACTC1P68032 377 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 ACTA1P68133 377 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 IL10RAQ13651 578 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 NUDT18Q6ZVK8 323 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 GLB1L2Q8IW92 636 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 ASB12Q8WXK4 309 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 Q96M85 177 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 TSSK2Q96PF2 358 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 NKX6-2Q9C056 277 aaPredicted RBP12.4□□□□□ -0.42
PCNX3-202ENST00000439247 SLC6A15Q9H2J7 730 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 AKAP7Q9P0M2 348 aaPredicted RBP12.4□□□□□ -0.42
PCNX3-202ENST00000439247 DOCK8Q8NF50 2099 aa12.4□□□□□ -0.42
PCNX3-202ENST00000439247 TICRRQ7Z2Z1 1910 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 TBC1D3EA0A087X179 549 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 UBE2QL1A1L167 161 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 SNRPGP15A8MWD9 76 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 FBXO45P0C2W1 286 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 LIPCP11150 499 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 AK4P27144 223 aaPredicted RBP12.4□□□□□ -0.43
PCNX3-202ENST00000439247 RPS27P42677 84 aaKnown RBP12.4□□□□□ -0.43
PCNX3-202ENST00000439247 C4orf46Q504U0 113 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 TANGO2Q6ICL3 276 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 RPL22L1Q6P5R6 122 aaKnown RBP12.4□□□□□ -0.43
PCNX3-202ENST00000439247 TSSK4Q6SA08 328 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 TMPRSS11FQ6ZWK6 438 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 TMPRSS12Q86WS5 348 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 OR10AC1Q8NH08 325 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 LILRB1Q8NHL6 650 aaPredicted RBP12.4□□□□□ -0.43
PCNX3-202ENST00000439247 MOAP1Q96BY2 351 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 HSPA12BQ96MM6 686 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 C12orf57Q99622 126 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 SLC6A17Q9H1V8 727 aa12.4□□□□□ -0.43
PCNX3-202ENST00000439247 ESRP2Q9H6T0 727 aaKnown RBP12.4□□□□□ -0.43
PCNX3-202ENST00000439247 CACYBPQ9HB71 228 aaKnown RBP12.4□□□□□ -0.43
PCNX3-202ENST00000439247 DENND4AQ7Z401 1863 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 TRAV14DV4A0A0A6YYC5 116 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 GXYLT2A0PJZ3 443 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 VEGFDO43915 354 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 F12P00748 615 aaPredicted RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 RPN2P04844 631 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 IL5P05113 134 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 DUSP8Q13202 625 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 EXOSC7Q15024 291 aaKnown RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 ARHGAP11BQ3KRB8 267 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 UNQ9370/PRO34162Q6UXP9 181 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 STAC2Q6ZMT1 411 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 BIVMQ86UB2 503 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 CBLN2Q8IUK8 224 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 NAXDQ8IW45 347 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 C10orf90Q96M02 699 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 MS4A4EQ96PG1 132 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 MYADMQ96S97 322 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 CDCA3Q99618 268 aaPredicted RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 PCBD2Q9H0N5 130 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 PRSS16Q9NQE7 514 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 PLCL2Q9UPR0 1127 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 COLQQ9Y215 455 aaPredicted RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 IGLON5A6NGN9 336 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 ACOT7O00154 380 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 SOX1O00570 391 aaPredicted RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 LDB3O75112 727 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 WDPCPO95876 746 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 POU2F2P09086 479 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF888P0CJ79 500 aaPredicted RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 IGFBP4P22692 258 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 FCARP24071 287 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 PEBP1P30086 187 aaKnown RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 LTBRP36941 435 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 TMEM35AQ53FP2 167 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 OR2L13Q8N349 312 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF511Q8NB15 262 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 RNF166Q96A37 237 aaPredicted RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 RASD2Q96D21 266 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 HAVCR1Q96D42 359 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 RPP25Q9BUL9 199 aaKnown RBP12.39□□□□□ -0.43
PCNX3-202ENST00000439247 PLA2G2FQ9BZM2 168 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 ULBP3Q9BZM4 244 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 TMEM185BQ9H7F4 350 aa12.39□□□□□ -0.43
PCNX3-202ENST00000439247 TRAV8-7A0A075B6U6 113 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF749O43361 778 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 OR8G3PP0DMU2 310 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 LUMP51884 338 aaPredicted RBP12.38□□□□□ -0.43
PCNX3-202ENST00000439247 CDK3Q00526 305 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms