RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RNF175Q8N4F7 328 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 NHLRC2Q8NBF2 726 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 RNF149Q8NC42 400 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 DENND6BQ8NEG7 585 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF671Q8TAW3 534 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 FAM57AQ8TBR7 257 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 KLK6Q92876 244 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 SYAP1Q96A49 352 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 EEF2KMTQ96G04 330 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 CFAP36Q96G28 342 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 BSCL2Q96G97 398 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 IMMP1LQ96LU5 166 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF184Q99676 751 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 PRMT1Q99873 361 aaKnown RBP1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 CRACR2AQ9BSW2 395 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 MINDY3Q9H8M7 445 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 NTN4Q9HB63 628 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 KLRF1Q9NZS2 232 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 IL19Q9UHD0 177 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 HOOK1Q9UJC3 728 aaKnown RBP1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 SCML1Q9UN30 329 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 EXOC6BQ9Y2D4 811 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 KIF3AQ9Y496 699 aa1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 PCYT1BQ9Y5K3 369 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P18-201ENST00000438801 SPTY2D1-AS1A0A0U1RR47 76 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 RNF103-CHMP3A0A140T963 221 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 FAM231BA6NCW3 169 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 FAM86B1E9PN63 330 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ACSL4O60488 711 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 KERAO60938 352 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 LETM1O95202 739 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 FAM86B2P0C5J1 330 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ACKR3P25106 362 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 CASQ1P31415 396 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 AKT2P31751 481 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 PRKCIP41743 596 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 TNFSF10P50591 281 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 P2RY4P51582 365 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 RAG2P55895 527 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 PTENP60484 403 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 GMFBP60983 142 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ST8SIA6P61647 398 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ACTN3Q08043 901 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ABRQ12979 859 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 NFE2L1Q14494 772 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 SLC17A1Q14916 467 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 SMU1Q2TAY7 513 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANKRD55Q3KP44 614 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANKDD1AQ495B1 522 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 PAN3Q58A45 887 aaKnown RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 C12orf60Q5U649 245 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 RAET1GQ6H3X3 334 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 KDELC1Q6UW63 502 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 TMEM110Q86TL2 294 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 TUSC5Q8IXB3 177 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 PIANPQ8IYJ0 282 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 STKLD1Q8NE28 680 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 IPMKQ8NFU5 416 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 SDR42E1Q8WUS8 393 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 GIMAP1Q8WWP7 306 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ST6GALNAC6Q969X2 333 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 C16orf45Q96MC5 204 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 TECTBQ96PL2 329 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 LRRC2Q9BYS8 371 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 FAM129AQ9BZQ8 928 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF350Q9GZX5 532 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 NXF3Q9H4D5 531 aaKnown RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 THAP9Q9H5L6 903 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 SRD5A3Q9H8P0 318 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 AKIRIN1Q9H9L7 192 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 RNPEPL1Q9HAU8 725 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ELL3Q9HB65 397 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 CHCHD3Q9NX63 227 aaKnown RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 TAS2R3Q9NYW6 316 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ACTR3BQ9P1U1 418 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 DNAJB9Q9UBS3 223 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 MTRF1LQ9UGC7 380 aaKnown RBP1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 TEKT2Q9UIF3 430 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 GPR132Q9UNW8 380 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 TNXBP22105 4242 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 PCM1Q15154 2024 aa1.73□□□□□ -2.13
HMGB1P18-201ENST00000438801 ARHGAP21Q5T5U3 1957 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 CLPSL1A2RUU4 121 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 LRRD1A4D1F6 860 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 A4D1N5 150 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 KRT87PA6NCN2 255 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 KLRC4-KLRK1H3BQV0 150 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 PDXKO00764 312 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 CCSO14618 274 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 MAGEB4O15481 346 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 NUDT21O43809 227 aaKnown RBP1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 SELENOFO60613 162 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 FOXH1O75593 365 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 DUSP14O95147 198 aaKnown RBP1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 F10P00742 488 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 HEXBP07686 556 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 GSTA2P09210 222 aa1.72□□□□□ -2.13
HMGB1P18-201ENST00000438801 ALPIP09923 528 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms