RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ECI1P42126 302 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 SESN3P58005 492 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 TAS2R39P59534 338 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.04□□□□□ -0.96
RTN4-211ENST00000438462 GPAT4Q86UL3 456 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 CCDC36Q8IYA8 594 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 AGGF1Q8N302 714 aaeCLIP9.04□□□□□ -0.96
RTN4-211ENST00000438462 OR6Y1Q8NGX8 325 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 C11orf40Q8WZ69 217 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 WNT10AQ9GZT5 417 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 SIRPDQ9H106 197 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 SLC35C2Q9NQQ7 365 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 GRHL1Q9NZI5 618 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 TMEM181Q9P2C4 612 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 CLN8Q9UBY8 286 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 MIOXQ9UGB7 285 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 CHRNA9Q9UGM1 479 aa9.04□□□□□ -0.96
RTN4-211ENST00000438462 NUP214P35658 2090 aaPredicted RBP9.04□□□□□ -0.96
RTN4-211ENST00000438462 MEGF11A6BM72 1044 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 TTC36A6NLP5 189 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 PRR23D1E9PI22 279 aaPredicted RBP9.03□□□□□ -0.96
RTN4-211ENST00000438462 GTPBP1O00178 669 aaKnown RBP9.03□□□□□ -0.96
RTN4-211ENST00000438462 CHST1O43916 411 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 EIF1BO60739 113 aaKnown RBP9.03□□□□□ -0.96
RTN4-211ENST00000438462 PRR23D2P0DMB1 279 aaPredicted RBP9.03□□□□□ -0.96
RTN4-211ENST00000438462 CPT2P23786 658 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 IVDP26440 423 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 LCN1P31025 176 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 CRHR1P34998 444 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 MMP15P51511 669 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 NCBP2P52298 156 aaKnown RBP eCLIP9.03□□□□□ -0.96
RTN4-211ENST00000438462 SLC35A1P78382 337 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 RBBP4Q09028 425 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 MOGQ16653 247 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 CEACAM16Q2WEN9 425 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 TMEM255AQ5JRV8 349 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 ETV3LQ6ZN32 361 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 MMGT1Q8N4V1 131 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 TEX9Q8N6V9 391 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 ZNF519Q8TB69 540 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 C1orf54Q8WWF1 131 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 ST8SIA1Q92185 356 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 MAELQ96JY0 434 aaKnown RBP9.03□□□□□ -0.96
RTN4-211ENST00000438462 LINC00470Q9BZP3 86 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 RAB18Q9NP72 206 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 CTPS2Q9NRF8 586 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 GIN1Q9NXP7 522 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 TFR2Q9UP52 801 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 GPR45Q9Y5Y3 372 aa9.03□□□□□ -0.96
RTN4-211ENST00000438462 PLSCR5A0PG75 271 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 H3BNH8 94 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 RPL36A-HNRNPH2H7BZ11 118 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 ZNF205O95201 554 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 RAB36O95755 333 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 PAHP00439 452 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 IGHV3-13P01766 116 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 IMPDH2P12268 514 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 RYKP34925 604 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 GIPRP48546 466 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 LUMP51884 338 aaPredicted RBP9.02□□□□□ -0.97
RTN4-211ENST00000438462 TEX35Q5T0J7 233 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 WDR25Q64LD2 544 aaPredicted RBP9.02□□□□□ -0.97
RTN4-211ENST00000438462 NLRC3Q7RTR2 1065 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 GALNT7Q86SF2 657 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 PAQR4Q8N4S7 273 aaPredicted RBP9.02□□□□□ -0.97
RTN4-211ENST00000438462 ZNF614Q8N883 585 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 DTX3Q8N9I9 347 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 IL17DQ8TAD2 202 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 HOXB13Q92826 284 aaPredicted RBP9.02□□□□□ -0.97
RTN4-211ENST00000438462 OTUB1Q96FW1 271 aaPredicted RBP9.02□□□□□ -0.97
RTN4-211ENST00000438462 ARHGDIGQ99819 225 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 DERL2Q9GZP9 239 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 MUC13Q9H3R2 512 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 RNF14Q9UBS8 474 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 RNF11Q9Y3C5 154 aa9.02□□□□□ -0.97
RTN4-211ENST00000438462 TSSC4Q9Y5U2 329 aaPredicted RBP9.02□□□□□ -0.97
RTN4-211ENST00000438462 FAT2Q9NYQ8 4349 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 TCRBV4S1A1TA0A5B7 111 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 PHYHO14832 338 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 IGF2P01344 180 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 CD55P08174 381 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 ACP2P11117 423 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 MAP3K8P41279 467 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 TNFAIP6P98066 277 aaPredicted RBP9.01□□□□□ -0.97
RTN4-211ENST00000438462 CRYMQ14894 314 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 VPS26BQ4G0F5 336 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 KLHL26Q53HC5 615 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 KHDC1LQ5JSQ8 128 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 CRIP3Q6Q6R5 217 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 LRIG3Q6UXM1 1119 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 PTOV1Q86YD1 416 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 ZNF584Q8IVC4 421 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 OR5AU1Q8NGC0 362 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 UBTD2Q8WUN7 234 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 ELP4Q96EB1 424 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 THUMPD3Q9BV44 507 aaKnown RBP9.01□□□□□ -0.97
RTN4-211ENST00000438462 CCDC106Q9BWC9 280 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 SF3B5Q9BWJ5 86 aaKnown RBP9.01□□□□□ -0.97
RTN4-211ENST00000438462 SHCBP1LQ9BZQ2 653 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 RMND5AQ9H871 391 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms