RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF35P13682 527 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 CEBPGP53567 150 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 KIAA1024LP59773 190 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 IL13RA1P78552 427 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SLC25A30Q5SVS4 291 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 HEPHL1Q6MZM0 1159 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 CFAP77Q6ZQR2 320 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 RFPL4BQ6ZWI9 263 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SLC35D2Q76EJ3 337 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 CMIPQ8IY22 773 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 PM20D2Q8IYS1 436 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 CMTM4Q8IZR5 234 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 LINC01555Q8NAE3 123 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SMIM4Q8WVI0 70 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 ZFPM2Q8WW38 1151 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 ASB12Q8WXK4 309 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF764Q96H86 408 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 LRFN5Q96NI6 719 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 TEX101Q9BY14 249 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SLC22A7Q9Y694 548 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SEC16AO15027 2179 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SIP14410 1827 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 BLACEA4D250 179 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 IFITM5A6NNB3 132 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF705EA8MWA4 302 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 AIPO00170 330 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 GPR171O14626 319 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 HLA-AP01891 365 aaKnown RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 CALCBP10092 127 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 IFNGR1P15260 489 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 ANXA7P20073 488 aaKnown RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 TACR3P29371 465 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 NUDT1P36639 197 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 MMP15P51511 669 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 YPEL5P62699 121 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SPOCK1Q08629 439 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 EXOSC2Q13868 293 aaKnown RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 UBXN2BQ14CS0 331 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 ZXDCQ2QGD7 858 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 CHRFAM7AQ494W8 412 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 GLYR1Q49A26 553 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 MANEAQ5SRI9 462 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 AWAT2Q6E213 333 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 STEAP1BQ6NZ63 245 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 IDO2Q6ZQW0 420 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SLC16A9Q7RTY1 509 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 CD163Q86VB7 1156 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF454Q8N9F8 522 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 MORN4Q8NDC4 146 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 STEAP2Q8NFT2 490 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 OR10A5Q9H207 317 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 SAV1Q9H4B6 383 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 PTGES2Q9H7Z7 377 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 HRASLSQ9HDD0 168 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 ASF1BQ9NVP2 202 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 EXOGQ9Y2C4 368 aaKnown RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 A0A087WV62 115 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 TRAV1-2A0A0B4J238 106 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 A6NIZ1 184 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 M0R036 132 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF593O00488 134 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-205ENST00000438362 CTNSO60931 367 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 SIX6O95475 246 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 CEACAM5P06731 702 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 UBBP0CG47 229 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 UBCP0CG48 685 aaKnown RBP6.15□□□□□ -1.43
CSDE1-205ENST00000438362 SPI1P17947 270 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 ARHGDIBP52566 201 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 RAP1BP61224 184 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 RAP1AP62834 184 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 RPS27AP62979 156 aaKnown RBP6.15□□□□□ -1.43
CSDE1-205ENST00000438362 UBA52P62987 128 aaKnown RBP6.15□□□□□ -1.43
CSDE1-205ENST00000438362 MAT1AQ00266 395 aaKnown RBP6.15□□□□□ -1.43
CSDE1-205ENST00000438362 RUNX2Q13950 521 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 CLVS2Q5SYC1 327 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 VASNQ6EMK4 673 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 PHOSPHO2Q8TCD6 241 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 ARL11Q969Q4 196 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 DHRS1Q96LJ7 313 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 PCDHB16Q9NRJ7 776 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF701Q9NV72 531 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-205ENST00000438362 STEAP1Q9UHE8 339 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 SLC23A1Q9UHI7 598 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 GMEB2Q9UKD1 530 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 FLVCR2Q9UPI3 526 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 KCNIP3Q9Y2W7 256 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 MYO16Q9Y6X6 1858 aa6.15□□□□□ -1.43
CSDE1-205ENST00000438362 RALGAPA2Q2PPJ7 1873 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 A0A0D9SG52 128 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 hCG_1807616A0A1W2PRN6 198 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 POM121BA6NF01 834 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 F8W036 122 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 PLPP2O43688 288 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 MPIG6BO95866 241 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TPOP07202 933 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SLC2A5P22732 501 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 POU3F4P49335 361 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 PER3P56645 1201 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TAS2R20P59543 309 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 BLOC1S1P78537 153 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms