RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 UBAP1Q9NZ09 502 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SEC14L4Q9UDX3 406 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 IL20RAQ9UHF4 553 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ZNF229Q9UJW7 825 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 NDRG4Q9ULP0 352 aaKnown RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 B3GNT3Q9Y2A9 372 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SLC6A5Q9Y345 797 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 PCDHGB5Q9Y5G0 923 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CDH10Q9Y6N8 788 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 U3KQE9 123 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 AKAP13Q12802 2813 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 KNTC1P50748 2209 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 CNOT1A5YKK6 2376 aaKnown RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 A0A0J9YW62 118 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 H0YC42 278 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 H3BN98 237 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 ACOT7O00154 380 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 PLPP3O14495 311 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 OR2T1O43869 369 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 HCN1O60741 890 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 RCBTB2O95199 551 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 ACADSP16219 412 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 BMP7P18075 431 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 MYF6P23409 242 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 GRPRP30550 384 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 UQCRC1P31930 480 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 SFTPDP35247 375 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 IDUAP35475 653 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 GGT2P36268 569 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 AQP2P41181 271 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 SLC9A3P48764 834 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 SUCLG1P53597 346 aaKnown RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TPD52P55327 224 aaPredicted RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 CLDN20P56880 219 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 EFNB1P98172 346 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 EGR3Q06889 387 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 KEAP1Q14145 624 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 GINS1Q14691 196 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TAF11Q15544 211 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 OR7A5Q15622 319 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 CTU2Q2VPK5 515 aaKnown RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 NADK2Q4G0N4 442 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 CMPK2Q5EBM0 449 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 CLEC12AQ5QGZ9 265 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 FAM69AQ5T7M9 428 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 ZNF691Q5VV52 312 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 SLX4IPQ5VYV7 408 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TTC23Q5W5X9 447 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 C12orf73Q69YU5 71 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 ACSM5Q6NUN0 579 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 RPUSD3Q6P087 351 aaKnown RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 SMARCD3Q6STE5 483 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TMPPEQ6ZT21 453 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 GGNQ86UU5 652 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 CD163Q86VB7 1156 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 IQCF1Q8N6M8 205 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 FAM98AQ8NCA5 519 aaKnown RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 C1orf162Q8NEQ5 155 aaPredicted RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 FANK1Q8TC84 345 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 OSTF1Q92882 214 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 MIB2Q96AX9 1013 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 DTNBP1Q96EV8 351 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 ZNF570Q96NI8 536 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 OR5B2Q96R09 309 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 KCNJ15Q99712 375 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TSSK6Q9BXA6 273 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 ADNPQ9H2P0 1102 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 OR52D1Q9H346 318 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 SLC25A19Q9HC21 320 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 SMURF1Q9HCE7 757 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 ZNF71Q9NQZ8 489 aaPredicted RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 C14orf119Q9NWQ9 140 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TAS2R5Q9NYW4 299 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 H2AFY2Q9P0M6 372 aaPredicted RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 LUZP4Q9P127 313 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TNFRSF10DQ9UBN6 386 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 ENOPH1Q9UHY7 261 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TUBD1Q9UJT1 453 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 TRAPPC4Q9Y296 219 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 HDGFL3Q9Y3E1 203 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 GMPPBQ9Y5P6 360 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 LIPGQ9Y5X9 500 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 SPIN1Q9Y657 262 aaPredicted RBP6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 X6R8D5 127 aa6.3□□□□□ -1.4
LSM3P3-201ENST00000436601 AHCTF1Q8WYP5 2266 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 TRGV5A0A0B4J1U4 118 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 A0A1B0GVC2 190 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 GJE1A6NN92 205 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 ZNF814B7Z6K7 855 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 MCIDASD6RGH6 385 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 MS4A18H0YCH9 400 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 BLOC1S5-TXNDC5H3BN57 136 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 M0R129 80 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 BHLHE40O14503 412 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 TNFSF11O14788 317 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 BCKDKO14874 412 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 AKR7A3O95154 331 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 NDUFB2O95178 105 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 PMS2P2O95744 297 aa6.29□□□□□ -1.4
LSM3P3-201ENST00000436601 ACTL6AO96019 429 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms