RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 OR11H7Q8NGC8 314 aa9.52□□□□□ -0.89
CLSTN1-203ENST00000435891 MOSPD2Q8NHP6 518 aa9.52□□□□□ -0.89
CLSTN1-203ENST00000435891 MARVELD3Q96A59 401 aa9.52□□□□□ -0.89
CLSTN1-203ENST00000435891 CNN2Q99439 309 aaKnown RBP9.52□□□□□ -0.89
CLSTN1-203ENST00000435891 DDOQ99489 341 aa9.52□□□□□ -0.89
CLSTN1-203ENST00000435891 GFI1Q99684 422 aa9.52□□□□□ -0.89
CLSTN1-203ENST00000435891 SLC25A18Q9H1K4 315 aa9.52□□□□□ -0.89
CLSTN1-203ENST00000435891 AUNIPQ9H7T9 357 aa9.52□□□□□ -0.89
CLSTN1-203ENST00000435891 TRBV2A0A0J9YWF9 115 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 A0A1B0GVT2 93 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ACOD1A6NK06 481 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 B4DGG1 531 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 F8W036 122 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 SIGLEC5O15389 551 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 DHFRP00374 187 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 GIFP27352 417 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 RBM34P42696 430 aaKnown RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 NANOS3P60323 173 aaKnown RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 SIGLEC14Q08ET2 396 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 FZD2Q14332 565 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 PARGQ86W56 976 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 MCATQ8IVS2 390 aaKnown RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 TMEM151BQ8IW70 566 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 BEST4Q8NFU0 473 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 OR52H1Q8NGJ2 320 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 SNX33Q8WV41 574 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 MRPL38Q96DV4 380 aaKnown RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 DNAJA3Q96EY1 480 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 GSX2Q9BZM3 304 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 POLE3Q9NRF9 147 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 PCDH15Q96QU1 1955 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 CSTAP01040 98 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 APOC1P02654 83 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 CXCL3P19876 107 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ACTC1P68032 377 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ACTA1P68133 377 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF169Q14929 603 aaPredicted RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNHIT3Q15649 155 aaPredicted RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 MANEAQ5SRI9 462 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 PYHIN1Q6K0P9 492 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 MS4A15Q8N5U1 240 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 OR51Q1Q8NH59 317 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 NANPQ8TBE9 248 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 SLC2A12Q8TD20 617 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 HAVCR2Q8TDQ0 301 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 SLCO1C1Q9NYB5 712 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 MRPL15Q9P015 296 aaKnown RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 NCDNQ9UBB6 729 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 FBXL21Q9UKT6 434 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ELF5Q9UKW6 265 aaPredicted RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 POMT2Q9UKY4 750 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 WDR87Q6ZQQ6 2873 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 IGKV1D-42A0A075B6H8 117 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 A0A087WUJ7 227 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ANKRD61A6NGH8 418 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 C17orf51A8MQB3 221 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 LINC00587B1AMM8 73 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 TRIM3O75382 744 aaPredicted RBP9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 SPI1P17947 270 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 EDNRAP25101 427 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 MAOBP27338 520 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 GPR3P46089 330 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 CLDN12P56749 244 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 TRAM1Q15629 374 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF141Q15928 474 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 BICRALQ6AI39 1079 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 OOSP2Q86WS3 158 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 BCORP1Q8N888 145 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 LGALS14Q8TCE9 139 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 C3orf49Q96BT1 292 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 HSPA12BQ96MM6 686 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 MAP3K3Q99759 626 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 LMAN2LQ9H0V9 348 aa9.51□□□□□ -0.89
CLSTN1-203ENST00000435891 OR2T7P0C7T2 308 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 ANXA3P12429 323 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 STOMP27105 288 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 CD226Q15762 336 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 CBLN3Q6UW01 205 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF687Q8N1G0 1237 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF321PQ8N8H1 164 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 C19orf47Q8N9M1 422 aaKnown RBP9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 ZSCAN1Q8NBB4 408 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 OR2T27Q8NH04 317 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 Q96M85 177 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 TINAGL1Q9GZM7 467 aaPredicted RBP9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 SEMA6CQ9H3T2 930 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 NOX4Q9NPH5 578 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 RPS6KB2Q9UBS0 482 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 CYP8B1Q9UNU6 501 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 NPFFR2Q9Y5X5 522 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 SPTY2D1-AS1A0A0U1RR47 76 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 FLRT2O43155 660 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 MT-ND4P03905 459 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 TCRBP04435 133 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 WNT1P04628 370 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 UCHL1P09936 223 aa9.5□□□□□ -0.89
CLSTN1-203ENST00000435891 THEGLP0DJG4 465 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms