RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 M0QZQ0 153 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 UBBP0CG47 229 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 RPL7P18124 248 aaKnown RBP10.4□□□□□ -0.75
SCN4A-201ENST00000435607 ENTPD8Q5MY95 495 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 BAGE3Q86Y29 109 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 BAGE2Q86Y30 109 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 CDC20BQ86Y33 519 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 TCTE3Q8IZS6 198 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF775Q96BV0 537 aaPredicted RBP10.4□□□□□ -0.75
SCN4A-201ENST00000435607 OR11A1Q9GZK7 315 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 SAV1Q9H4B6 383 aaPredicted RBP10.4□□□□□ -0.75
SCN4A-201ENST00000435607 HS3ST3A1Q9Y663 406 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 MYH1P12882 1939 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 H0Y8G0 127 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 SH2D1BO14796 132 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 SLC31A2O15432 143 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 TNFRSF17Q02223 184 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF266Q14584 549 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 RPE65Q16518 533 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF628Q5EBL2 1059 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 PIWIL3Q7Z3Z3 882 aaKnown RBP10.4□□□□□ -0.75
SCN4A-201ENST00000435607 NAGSQ8N159 534 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 NHLRC2Q8NBF2 726 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 NEIL2Q969S2 332 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 FAM173AQ9BQD7 235 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 SLC25A18Q9H1K4 315 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 OR52A5Q9H2C5 316 aa10.4□□□□□ -0.75
SCN4A-201ENST00000435607 NID2Q14112 1375 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 NUDT19A8MXV4 375 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ST8SIA5O15466 376 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 PENKP01210 267 aaPredicted RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 TAS2R45P59539 299 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 GABREP78334 506 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 TNK1Q13470 666 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ZDHHC24Q6UX98 284 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 OR2T35Q8NGX2 323 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ADAM29Q9UKF5 820 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 HCFC2Q9Y5Z7 792 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF593O00488 134 aaPredicted RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 SDHDO14521 159 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 GJA4P35212 333 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 HNRNPFP52597 415 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 UBE2KP61086 200 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM31Q5JXX7 168 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 PHYHD1Q5SRE7 291 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 FAM111BQ6SJ93 734 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 TFAP2CQ92754 450 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 SETD1AO15047 1707 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ROBO1Q9Y6N7 1651 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ACOT8O14734 319 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 GALR2O43603 387 aaPredicted RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ELAVL4P26378 380 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 HLA-DMAP28067 261 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 PSMB10P40306 273 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 RPS27AP62979 156 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 UBA52P62987 128 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 KCNJ10P78508 379 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 DLK2Q6UY11 383 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 OR10G3Q8NGC4 313 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 OR10AD1Q8NGE0 317 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 NLKQ9UBE8 527 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 USP22Q9UPT9 525 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 MRC1P22897 1456 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ARHGEF28Q8N1W1 1705 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 MROH6A6NGR9 719 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ALOX12BO75342 701 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 SORBS2O94875 1100 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 HOXA11P31270 313 aaPredicted RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 HTR2BP41595 481 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 DEFB109BQ30KR1 87 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 PARS2Q7L3T8 475 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 KANSL1Q7Z3B3 1105 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 PAQR8Q8TEZ7 354 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 HSD17B8Q92506 261 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 FUBP1Q96AE4 644 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 CTRCQ99895 268 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF446Q9NWS9 450 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 M0R1B8 84 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 CTXN2P0C2S0 81 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF865P0CJ78 1059 aaPredicted RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 PVRP15151 417 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 C21orf33P30042 268 aaPredicted RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 CSNK1DP48730 415 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 MRPL19P49406 292 aaKnown RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 PRLHRP49683 370 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 C19orf35Q6ZS72 473 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 TDHQ8IZJ6 230 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 BPIFB2Q8N4F0 458 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 FCRL3Q96P31 734 aaPredicted RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ZCCHC4Q9H5U6 513 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF331Q9NQX6 463 aaPredicted RBP10.39□□□□□ -0.75
SCN4A-201ENST00000435607 NECAP2Q9NVZ3 263 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 LYRM1O43325 122 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 DLX5P56178 289 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 ACSM1Q08AH1 577 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 COMMD7Q86VX2 200 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 OR1M1Q8NGA1 313 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM230Q96A57 120 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 TECTBQ96PL2 329 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 IKZF5Q9H5V7 419 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms