RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 A0A0D9SG52 128 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF729A6NN14 1252 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 M0QYG6 137 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 YIF1AO95070 293 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 CD3DP04234 171 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 HMGN2P05204 90 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FBP1P09467 338 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 WASP42768 502 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 RHOUQ7L0Q8 258 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 TMPRSS12Q86WS5 348 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 CCDC116Q8IYX3 515 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 OR4A4PQ8NGN8 299 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 OR1J4Q8NGS1 313 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PPP1R1CQ8WVI7 109 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 KATNBL1Q9H079 304 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 TSPAN10Q9H1Z9 355 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 POFUT1Q9H488 388 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 OR5V1Q9UGF6 321 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PATJQ8NI35 1801 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FEZF1A0PJY2 475 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 CXorf65A6NEN9 183 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 IFITM5A6NNB3 132 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FAM171A2A8MVW0 826 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ZGLP1P0C6A0 271 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 SRMP19623 302 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 NT5EP21589 574 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 GALP22466 123 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 MRPS6P82932 125 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PRAMEF17Q5VTA0 474 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 THSD4Q6ZMP0 1018 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 LRRC69Q6ZNQ3 347 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 USP50Q70EL3 339 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 MRPL38Q96DV4 380 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 HSPA12BQ96MM6 686 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ZMAT3Q9HA38 289 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 SLC7A7Q9UM01 511 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 TDRD15B5MCY1 1934 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 TRAV18A0A075B6X5 111 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 TRAV27A0A087WT01 109 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 C13orf42A0A1B0GVH6 325 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 A0A1W2PS29 197 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 SERTM1A2A2V5 107 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 URADA6NGE7 173 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 STC2O76061 302 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PRH1P02810 166 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 MAS1P04201 325 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 MPC1LP0DKB6 136 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 GABRR2P28476 465 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 P2RY4P51582 365 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 RIPPLY1Q0D2K3 151 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 TMEM44Q2T9K0 475 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 EXOSC6Q5RKV6 272 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 KCTD9Q7L273 389 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 GID4Q8IVV7 300 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 SDR9C7Q8NEX9 313 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 TRMT2BQ96GJ1 504 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ZDHHC12Q96GR4 267 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 SELENOIQ9C0D9 397 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF223Q9UK11 482 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FOXJ3Q9UPW0 622 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PLPP1O14494 284 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 COCHO43405 550 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FCMRO60667 390 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 GIMD1P0DJR0 217 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 AVPR2P30518 371 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 CD80P33681 288 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FAUP35544 74 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 NCBP2P52298 156 aaKnown RBP eCLIP6.86□□□□□ -1.311e-9■■■□□ 17.6
CPSF6-202ENST00000435070 ACTR1AP61163 376 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 AIMP2Q13155 320 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 IRF5Q13568 498 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PLEKHS1Q5SXH7 462 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 DMKNQ6E0U4 476 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 GDF6Q6KF10 455 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 BAIAP2L2Q6UXY1 529 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FAM83HQ6ZRV2 1179 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FAM160A2Q8N612 972 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 INO80EQ8NBZ0 244 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF248Q8NDW4 579 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PFN4Q8NHR9 129 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PELI1Q96FA3 418 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 GGACTQ9BVM4 153 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PARP12Q9H0J9 701 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 B4GALT6Q9UBX8 382 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 SLC27A6Q9Y2P4 619 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 MYO16Q9Y6X6 1858 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 A0A0G2JLL6 359 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 BCL2L11O43521 198 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ITGA10O75578 1167 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 GRB14Q14449 540 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 HENMT1Q5T8I9 393 aaKnown RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PGAP1Q75T13 922 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PRRT2Q7Z6L0 340 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 MRGPREQ86SM8 312 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 KCNRGQ8N5I3 272 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF383Q8NA42 475 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 OR13C2Q8NGS9 318 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 SLAMF9Q96A28 289 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 VPS25Q9BRG1 176 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms