RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CTDSPLO15194 276 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 PIN1P1O15428 100 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 GSTZ1O43708 216 aaPredicted RBP16.91■□□□□ 0.3
CLK1-205ENST00000434813 SCO2O43819 266 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 TMEM127O75204 238 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 SRMP19623 302 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 GRPRP30550 384 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 OR1D4P47884 311 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 SLC6A8P48029 635 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 RAB25P57735 213 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 NANOS3P60323 173 aaKnown RBP16.91■□□□□ 0.3
CLK1-205ENST00000434813 HNRNPKP61978 463 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLK1-205ENST00000434813 ELAVL1Q15717 326 aaKnown RBP16.91■□□□□ 0.3
CLK1-205ENST00000434813 TOMM5Q8N4H5 51 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 RGP1Q92546 391 aaPredicted RBP16.91■□□□□ 0.3
CLK1-205ENST00000434813 CLDN23Q96B33 292 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 YIPF2Q9BWQ6 316 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 RABL2AQ9UBK7 228 aaPredicted RBP16.91■□□□□ 0.3
CLK1-205ENST00000434813 RABL2BQ9UNT1 228 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 PCDHGA9Q9Y5G4 932 aaKnown RBP16.91■□□□□ 0.3
CLK1-205ENST00000434813 C7orf66A4D0T2 115 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 RHPN2P1A8MT19 583 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 A8MUA0 341 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 FAM171A2A8MVW0 826 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 IDSB3KWA1 339 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ICOSLGO75144 302 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ZFPL1O95159 310 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 TACR3P29371 465 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 CXCL12P48061 93 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 SRP9P49458 86 aaKnown RBP16.9■□□□□ 0.3
CLK1-205ENST00000434813 DGCR2P98153 550 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 RPL18Q07020 188 aaKnown RBP16.9■□□□□ 0.3
CLK1-205ENST00000434813 MRPL28Q13084 256 aaKnown RBP16.9■□□□□ 0.3
CLK1-205ENST00000434813 MAB21L1Q13394 359 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 FAM220AQ7Z4H9 259 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 NANOGNBQ7Z5D8 188 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 KCTD20Q7Z5Y7 419 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 SDR16C5Q8N3Y7 309 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ZNF511Q8NB15 262 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 LILRB4Q8NHJ6 448 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ZNF563Q8TA94 476 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ZNF671Q8TAW3 534 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.9■□□□□ 0.3
CLK1-205ENST00000434813 ADAMTS14Q8WXS8 1223 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ZNF524Q96C55 264 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 KTI12Q96EK9 354 aaPredicted RBP16.9■□□□□ 0.3
CLK1-205ENST00000434813 ADOQ96SZ5 270 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ADAM19Q9H013 955 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 MPDZO75970 2070 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 EML5Q05BV3 1969 aa16.9■□□□□ 0.3
CLK1-205ENST00000434813 ACOD1A6NK06 481 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 AIPO00170 330 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 CD3GP09693 182 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 TACSTD2P09758 323 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 NXPH1P58417 271 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 DCAF7P61962 342 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 ZNF117Q03924 483 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 TNK1Q13470 666 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 MESTQ5EB52 335 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 TIGD4Q8IY51 512 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 CARFQ8N187 725 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 TSSK2Q96PF2 358 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 DERL3Q96Q80 235 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 TSPAN32Q96QS1 320 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 GFI1Q99684 422 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 C7orf50Q9BRJ6 194 aaKnown RBP16.89■□□□□ 0.29
CLK1-205ENST00000434813 GTPBP2Q9BX10 602 aaKnown RBP16.89■□□□□ 0.29
CLK1-205ENST00000434813 FKRPQ9H9S5 495 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 GRHPRQ9UBQ7 328 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 SIT1Q9Y3P8 196 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 NUBP2Q9Y5Y2 271 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 TCRBV16S1A1N1A0A5B0 115 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 PSMD9O00233 223 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 F13BP05160 661 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 DCNP07585 359 aaKnown RBP16.89■□□□□ 0.29
CLK1-205ENST00000434813 HSD11B2P80365 405 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 EBPQ15125 230 aaKnown RBP16.89■□□□□ 0.29
CLK1-205ENST00000434813 Q5BKY6 102 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 CDC20BQ86Y33 519 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 SMIM4Q8WVI0 70 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 SCMH1Q96GD3 660 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 GAL3ST4Q96RP7 486 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 KLHDC3Q9BQ90 382 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 NUDT15Q9NV35 164 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 ANKRD10Q9NXR5 420 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 COPZ2Q9P299 210 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 KLHDC2Q9Y2U9 406 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 RNF215Q9Y6U7 377 aa16.89■□□□□ 0.29
CLK1-205ENST00000434813 A0A0A6YYJ9 748 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 TMEM72A0PK05 275 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 IFITM5A6NNB3 132 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 ABHD16AO95870 558 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 DHFRP00374 187 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 EVI2BP34910 448 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 BCL2L15Q5TBC7 163 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 ESPNLQ6ZVH7 1005 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 PLCZ1Q86YW0 608 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 SIAH3Q8IW03 269 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 PRR22Q8IZ63 422 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms