RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 IL1RAPQ9NPH3 570 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 MAN2C1Q9NTJ4 1040 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 ASB6Q9NWX5 421 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 CRIM1Q9NZV1 1036 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 TMCC3Q9ULS5 477 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 ANKHD1Q8IWZ3 2542 aaKnown RBP13.74□□□□□ -0.21
TREX1-201ENST00000433541 CACNA1DQ01668 2161 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 ZNF726A6NNF4 738 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 EFCAB9A8MZ26 197 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 MCIDASD6RGH6 385 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 SLC43A1O75387 559 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 CIB2O75838 187 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 IGFBP2P18065 325 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 CDH2P19022 906 aaPredicted RBP13.73□□□□□ -0.21
TREX1-201ENST00000433541 EDNRAP25101 427 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 GPR4P46093 362 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 SELENOPP49908 381 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 ITGADQ13349 1161 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 TSC22D1Q15714 1073 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 STK11Q15831 433 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 PODNL1Q6PEZ8 512 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 TBPL2Q6SJ96 375 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 STAC2Q6ZMT1 411 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 SLC46A3Q7Z3Q1 461 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 OAFQ86UD1 273 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 TMEM200AQ86VY9 491 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 RNF113BQ8IZP6 322 aaKnown RBP13.73□□□□□ -0.21
TREX1-201ENST00000433541 ANKK1Q8NFD2 765 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 STEAP2Q8NFT2 490 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 TMEM45BQ96B21 275 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 RSRC1Q96IZ7 334 aaKnown RBP13.73□□□□□ -0.21
TREX1-201ENST00000433541 ACTR6Q9GZN1 396 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 MAGIXQ9H6Y5 334 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 ZNF226Q9NYT6 803 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 KCNN3Q9UGI6 736 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 TMEM5Q9Y2B1 443 aa13.73□□□□□ -0.21
TREX1-201ENST00000433541 A0A087WUU8 490 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 A0A1W2PRG6 482 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 A0A1W2PRQ8 180 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 TCRBV5S2A0A599 114 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 HTR3EA5X5Y0 456 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 MS4A18H0YCH9 400 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 PRSS23O95084 383 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 HPRP00739 348 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 SEMG1P04279 462 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 HLA-DOBP13765 273 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 FUT4P22083 530 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 HOXC12P31275 282 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 DGCR6Q14129 220 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 P2RY6Q15077 328 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 TAF11Q15544 211 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 MS4A18Q3C1V0 323 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 SFRP5Q5T4F7 317 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 C1orf146Q5VVC0 180 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 MBOAT2Q6ZWT7 520 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 BHLHA15Q7RTS1 189 aaPredicted RBP13.72□□□□□ -0.21
TREX1-201ENST00000433541 TSEN54Q7Z6J9 526 aaKnown RBP13.72□□□□□ -0.21
TREX1-201ENST00000433541 PXKQ7Z7A4 578 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 EPHX4Q8IUS5 362 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 GABRG1Q8N1C3 465 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 GPR137CQ8N3F9 429 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 ZIC4Q8N9L1 334 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 POMGNT2Q8NAT1 580 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 SLC7A13Q8TCU3 470 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 FAM222BQ8WU58 562 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 FAM46AQ96IP4 442 aaKnown RBP13.72□□□□□ -0.21
TREX1-201ENST00000433541 ALKBH3Q96Q83 286 aaPredicted RBP13.72□□□□□ -0.21
TREX1-201ENST00000433541 EMC6Q9BV81 110 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 HDHD5Q9BXW7 423 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 NDEL1Q9GZM8 345 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 LRMDAQ9H2I8 198 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 SLC7A10Q9NS82 523 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 MED29Q9NX70 200 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 B3GAT1Q9P2W7 334 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 POMPQ9Y244 141 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 RCE1Q9Y256 329 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 GPR52Q9Y2T5 361 aa13.72□□□□□ -0.21
TREX1-201ENST00000433541 TRBV4-1A0A0J9YWV2 114 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 DHRS12A0PJE2 317 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 OR6C65A6NJZ3 312 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 AQP12BA6NM10 295 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 ZNF587BE7ETH6 402 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 GNGT2O14610 69 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 ACOT8O14734 319 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 TRAF3IP2O43734 574 aaPredicted RBP13.71□□□□□ -0.21
TREX1-201ENST00000433541 RAD51DO75771 328 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 CNOT4O95628 575 aaKnown RBP13.71□□□□□ -0.21
TREX1-201ENST00000433541 F13BP05160 661 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 ASAH2BP0C7U1 165 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 RAP2AP10114 183 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 IFNGR1P15260 489 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.21
TREX1-201ENST00000433541 MAKP20794 623 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 CCKARP32238 428 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 NTF4P34130 210 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 BIDP55957 195 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 LSM11P83369 360 aaKnown RBP eCLIP13.71□□□□□ -0.21
TREX1-201ENST00000433541 TGFBR3Q03167 851 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 TLE4Q04727 773 aa13.71□□□□□ -0.21
TREX1-201ENST00000433541 PRKCDQ05655 676 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms