RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SLC16A9Q7RTY1 509 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 ANKRD37Q7Z713 158 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 OR5L2Q8NGL0 311 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 OR2T4Q8NH00 348 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 TMEM234Q8WY98 164 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 TAAR8Q969N4 342 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 RASD2Q96D21 266 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 SMIM19Q96E16 107 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 RNF31Q96EP0 1072 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 PGLYRP3Q96LB9 341 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 Q96M85 177 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 MOGAT1Q96PD6 335 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 OR6C1Q96RD1 312 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 UBL7Q96S82 380 aaPredicted RBP11.65□□□□□ -0.54
DDX56-204ENST00000431640 LPAR4Q99677 370 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 ALG12Q9BV10 488 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 SLC22A4Q9H015 551 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 RNF32Q9H0A6 362 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 PPP1R3EQ9H7J1 279 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 SLC22A11Q9NSA0 550 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 CTSFQ9UBX1 484 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 TBC1D24Q9ULP9 559 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
DDX56-204ENST00000431640 DCHS1Q96JQ0 3298 aa11.65□□□□□ -0.55
DDX56-204ENST00000431640 SHISA3A0PJX4 238 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 PMS2P1A4D2B8 440 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 TM4SF5O14894 197 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 CPNE3O75131 537 aaKnown RBP11.64□□□□□ -0.55
DDX56-204ENST00000431640 TMEM127O75204 238 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 ALOX12BO75342 701 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 TRIM3O75382 744 aaPredicted RBP11.64□□□□□ -0.55
DDX56-204ENST00000431640 SCRG1O75711 98 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 BGLAPP02818 100 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 CSF3P09919 207 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 SPNP16150 400 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 MST1P26927 711 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 EVI2BP34910 448 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 ACVR1BP36896 505 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 GDI2P50395 445 aaKnown RBP11.64□□□□□ -0.55
DDX56-204ENST00000431640 RPL18Q07020 188 aaKnown RBP11.64□□□□□ -0.55
DDX56-204ENST00000431640 INSL4Q14641 139 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 CDK5R1Q15078 307 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 TP53I3Q53FA7 332 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 IDNKQ5T6J7 187 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 OVCH1Q7RTY7 1134 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 GRINAQ7Z429 371 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 LRRC28Q86X40 367 aaPredicted RBP11.64□□□□□ -0.55
DDX56-204ENST00000431640 EXD3Q8N9H8 876 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 C19orf18Q8NEA5 215 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 OR51L1Q8NGJ5 315 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 OR6K6Q8NGW6 343 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 OR5J2Q8NH18 312 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 NUBPLQ8TB37 319 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 STK35Q8TDR2 534 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 HPS1Q92902 700 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 KTI12Q96EK9 354 aaPredicted RBP11.64□□□□□ -0.55
DDX56-204ENST00000431640 PELI1Q96FA3 418 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 DEPDC7Q96QD5 511 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 SNX18Q96RF0 628 aa11.64□□□□□ -0.55
DDX56-204ENST00000431640 GFM1Q96RP9 751 aaKnown RBP11.64□□□□□ -0.55
DDX56-204ENST00000431640 TRBV2A0A0J9YWF9 115 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 A0A1W2PQ09 198 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 SMIM30A4D0T7 59 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 A8MVM7 634 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 FAM25AB3EWG3 89 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 FAM25CB3EWG5 89 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 FAM25GB3EWG6 89 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 IDSB3KWA1 339 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 OR2T1O43869 369 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 NCR1O76036 304 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 SLC2A2P11168 524 aaPredicted RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 TALDO1P37837 337 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 NAA10P41227 235 aaPredicted RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 RPS5P46782 204 aaKnown RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 BLVRAP53004 296 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 HCCSP53701 268 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 EMP2P54851 167 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 ZFP36L1Q07352 338 aaKnown RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 C17orf67Q0P5P2 114 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 IL18Q14116 193 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 CCDC157Q569K6 752 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 LINC01590Q5TEZ4 76 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 TRIQKQ629K1 86 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 LANCL3Q6ZV70 420 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 TRILQ7L0X0 811 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 SSX6Q7RTT6 188 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 RAB43Q86YS6 212 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 LSM14AQ8ND56 463 aaKnown RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 NFAM1Q8NET5 270 aaPredicted RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 IL17RDQ8NFM7 739 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 OR6S1Q8NH40 331 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 OR8K3Q8NH51 312 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 GPR119Q8TDV5 335 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 ADAD1Q96M93 576 aaKnown RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.63□□□□□ -0.55
DDX56-204ENST00000431640 RPRD1BQ9NQG5 326 aaKnown RBP11.63□□□□□ -0.55
DDX56-204ENST00000431640 TAS2R10Q9NYW0 307 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 GNG8Q9UK08 70 aa11.63□□□□□ -0.55
DDX56-204ENST00000431640 TMED7-TICAM2A0A0A6YYA0 188 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms