RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 EVPLQ92817 2033 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 PTPRKQ15262 1439 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RIMS1Q86UR5 1692 aaKnown RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MYO18AQ92614 2054 aaKnown RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 A0A1B0GVI7 797 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RNASEK-C17orf49H0YIS7 233 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MYL12BO14950 172 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 TNFSF14O43557 240 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ORC5O43913 435 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 HLA-EP13747 358 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MYL12AP19105 171 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 AGXTP21549 392 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FCARP24071 287 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 TM4SF1P30408 202 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ARRB2P32121 409 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CDKN2DP55273 166 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 GPR18Q14330 331 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 GPR19Q15760 415 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 PRR31Q5SQ13 230 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CCDC144NLQ6NUI1 221 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FRRS1Q6ZNA5 592 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ABI3BPQ7Z7G0 1075 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CBR4Q8N4T8 237 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FADS6Q8N9I5 356 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 OR6N2Q8NGY6 317 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RPLP0P6Q8NHW5 317 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 NFKBIDQ8NI38 313 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RNF133Q8WVZ7 376 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ARHGAP9Q9BRR9 750 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 TKTL2Q9H0I9 626 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FZD8Q9H461 694 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RERGLQ9H628 205 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 WDR54Q9H977 334 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 NLE1Q9NVX2 485 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RHCGQ9UBD6 479 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 NLKQ9UBE8 527 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RPRD2Q5VT52 1461 aaKnown RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 MED23Q9ULK4 1368 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 EFCAB5A4FU69 1503 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 UBE2QL1A1L167 161 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TMEM229AB2RXF0 380 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 G3V3Y1 287 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 DFFBO76075 338 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 LALBAP00709 142 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TK1P04183 234 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 NUMBP49757 651 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 FLT3LGP49771 235 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 KCNQ1P51787 676 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TIRAPP58753 221 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TUSC3Q13454 348 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 GAB1Q13480 694 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 PCLAFQ15004 111 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HERPUD1Q15011 391 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 SHBQ15464 509 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ATP6AP1LQ52LC2 224 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 B3GNTL1Q67FW5 361 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HIST2H2BCQ6DN03 193 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 HIST2H2BDQ6DRA6 164 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OR4A47Q6IF82 309 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TMEM179Q6ZVK1 233 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 MRPL52Q86TS9 123 aaKnown RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 MRPL41Q8IXM3 137 aaKnown RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 GRAPLQ8TC17 118 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 SMAP2Q8WU79 429 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 NRGNQ92686 78 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 NTNG2Q96CW9 530 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 SRD5A3Q9H8P0 318 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 SMCO4Q9NRQ5 59 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF107Q9UII5 783 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ZFP30Q9Y2G7 519 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 FBXO7Q9Y3I1 522 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 PTCH1Q13635 1447 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 C5orf52A6NGY3 159 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 MANSC4A6NHS7 340 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 GLOD5A6NK44 160 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 D6RAR5 112 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OR2T1O43869 369 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 TPST2O60704 377 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 RGS11O94810 467 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 DKK1O94907 266 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 NPY1RP25929 384 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 CST5P28325 142 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 SPRP35270 261 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 CTSCP53634 463 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 PPP1R1AQ13522 171 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF174Q15697 407 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 MICAQ29983 383 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OR2G6Q5TZ20 316 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 COLCA1Q6ZS62 124 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 PRICKLE2Q7Z3G6 844 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 LRRTM1Q86UE6 522 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 LRRC28Q86X40 367 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 SLC22A15Q8IZD6 547 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 MFSD4AQ8N468 514 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 INO80EQ8NBZ0 244 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OR4P4Q8NGL7 312 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OR9G4Q8NGQ1 327 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OR9I1Q8NGQ6 314 aa4.93□□□□□ -1.62
PTPN4-203ENST00000430976 OSTF1Q92882 214 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms