RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 DHDDSQ86SQ9 333 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 CKAP2Q8WWK9 683 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 SLC38A4Q969I6 547 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 ARHGDIGQ99819 225 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 EMC6Q9BV81 110 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 RAD21L1Q9H4I0 556 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 PIF1Q9H611 641 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 C12orf10Q9HB07 376 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 BARX1Q9HBU1 254 aaPredicted RBP10.23□□□□□ -0.77
HDAC4-202ENST00000430200 CA10Q9NS85 328 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 MED29Q9NX70 200 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 ZNF232Q9UNY5 417 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 TANC2Q9HCD6 1990 aa10.23□□□□□ -0.77
HDAC4-202ENST00000430200 TRAV36DV7A0A075B6V5 113 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 A0A087WUJ7 227 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 TMEM247A6NEH6 219 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 VWC2LB2RUY7 222 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 RPL36A-HNRNPH2H7BZ11 118 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 FBP2O00757 339 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 AIM2O14862 343 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 VAMP5O95183 116 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 IGKV3-15P01624 115 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 GZMMP51124 257 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 IDH3GP51553 393 aaPredicted RBP10.22□□□□□ -0.77
HDAC4-202ENST00000430200 POU3F1Q03052 451 aaPredicted RBP10.22□□□□□ -0.77
HDAC4-202ENST00000430200 TGFBR3Q03167 851 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 OR1Q1Q15612 314 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 DUSP7Q16829 419 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 ZSWIM7Q19AV6 140 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 CARD17Q5XLA6 110 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 CGB2Q6NT52 195 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 ANKRD16Q6P6B7 361 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 KLHL24Q6TFL4 600 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 CLEC2AQ6UVW9 174 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 NET1Q7Z628 596 aaPredicted RBP10.22□□□□□ -0.77
HDAC4-202ENST00000430200 MDP1Q86V88 176 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 ZCCHC24Q8N2G6 241 aaKnown RBP10.22□□□□□ -0.77
HDAC4-202ENST00000430200 OR6T1Q8NGN1 323 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 MAGEE2Q8TD90 523 aaPredicted RBP10.22□□□□□ -0.77
HDAC4-202ENST00000430200 TAMM41Q96BW9 452 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 MS4A3Q96HJ5 214 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 TXNDC15Q96J42 360 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 ADAD1Q96M93 576 aaKnown RBP10.22□□□□□ -0.77
HDAC4-202ENST00000430200 ZNF75AQ96N20 296 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 ANKRD27Q96NW4 1050 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 OXGR1Q96P68 337 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 SOX7Q9BT81 388 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 KATNB1Q9BVA0 655 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 FKRPQ9H9S5 495 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 CRLF2Q9HC73 371 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 NPHS2Q9NP85 383 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 YAE1D1Q9NRH1 226 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 TMEM45AQ9NWC5 275 aa10.22□□□□□ -0.77
HDAC4-202ENST00000430200 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 IGHV2OR16-5A0A0B4J2B6 119 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 M0R3G1 203 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 EDF1O60869 148 aaKnown RBP10.21□□□□□ -0.77
HDAC4-202ENST00000430200 KRT33AO76009 404 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 WNT11O96014 354 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 IGHV4-31P0DP07 118 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 H2AFXP16104 143 aaPredicted RBP10.21□□□□□ -0.77
HDAC4-202ENST00000430200 ZNF43P17038 809 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 FUT4P22083 530 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 APOBEC3AP31941 199 aaPredicted RBP10.21□□□□□ -0.77
HDAC4-202ENST00000430200 EFNA4P52798 201 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 LOXL1Q08397 574 aaPredicted RBP10.21□□□□□ -0.77
HDAC4-202ENST00000430200 FAM91A1Q658Y4 838 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 VHLLQ6RSH7 139 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 CXXC5Q7LFL8 322 aaKnown RBP10.21□□□□□ -0.77
HDAC4-202ENST00000430200 ARMC8Q8IUR7 673 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 DPP10Q8N608 796 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 ARIH2OSQ8N7S6 290 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 ADPRHL1Q8NDY3 354 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 HIPK4Q8NE63 616 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 CGREF1Q99674 301 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 RHNO1Q9BSD3 238 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 OBP2BQ9NPH6 170 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 INTS9Q9NV88 658 aaKnown RBP10.21□□□□□ -0.77
HDAC4-202ENST00000430200 RPS6KB2Q9UBS0 482 aa10.21□□□□□ -0.77
HDAC4-202ENST00000430200 IGHV4-61A0A0C4DH41 118 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 TMEM129A0AVI4 362 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 SLC35F4A4IF30 521 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 CPSF4LA6NMK7 179 aaKnown RBP10.2□□□□□ -0.78
HDAC4-202ENST00000430200 SLC43A1O75387 559 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 SERPINI2O75830 405 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 HLA-HP01893 362 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 OR4A8P0C604 315 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 B4GALT1P15291 398 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 TNFRSF1BP20333 461 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 PPIBP23284 216 aaKnown RBP10.2□□□□□ -0.78
HDAC4-202ENST00000430200 GTF2E2P29084 291 aaKnown RBP10.2□□□□□ -0.78
HDAC4-202ENST00000430200 THBS4P35443 961 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 UBE2NP61088 152 aaKnown RBP10.2□□□□□ -0.78
HDAC4-202ENST00000430200 VLDLRP98155 873 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 SF3A3Q12874 501 aaKnown RBP eCLIP10.2□□□□□ -0.78
HDAC4-202ENST00000430200 NPRL3Q12980 569 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 RAB35Q15286 201 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 RABL3Q5HYI8 236 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 HMBOX1Q6NT76 420 aa10.2□□□□□ -0.78
HDAC4-202ENST00000430200 ULK3Q6PHR2 472 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms