RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 V9GYS6 101 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR51F1A6NGY5 319 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 H0YIV9 168 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 K7ERQ8 282 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 MANBAO00462 879 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 NARSO43776 548 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 ADAP1O75689 374 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 VNN2O95498 520 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 FGBP02675 491 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 IFNW1P05000 195 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 FABP4P15090 132 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 IGFBP6P24592 240 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 CDK5Q00535 292 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 SP3Q02447 781 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 AIMP2Q13155 320 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF234Q14588 700 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF750Q32MQ0 723 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF322Q6U7Q0 402 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 ENPP7Q6UWV6 458 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 PXKQ7Z7A4 578 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 INO80EQ8NBZ0 244 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 C15orf40Q8WUR7 153 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 SPRYD4Q8WW59 207 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 TSSK3Q96PN8 268 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 LMF1Q96S06 567 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 TRIM2Q9C040 744 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 BHLHE41Q9C0J9 482 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 RNF39Q9H2S5 420 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 PIGVQ9NUD9 493 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 TDP1Q9NUW8 608 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM50BQ9Y247 325 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 EXOGQ9Y2C4 368 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 YLPM1P49750 1951 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 HTTP42858 3142 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 TRAV1-2A0A0B4J238 106 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 CCL15-CCL14A0A0B4J2E2 113 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 TRBV4-1A0A0J9YWV2 114 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 A0A1B0GTI1 187 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 TGOLN2O43493 480 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 PPBPP02775 128 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 IL3P08700 152 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 SDC1P18827 310 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 CDH11P55287 796 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 PCBP4P57723 403 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 IL2P60568 153 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 PITX1P78337 314 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 NKX6-1P78426 367 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 UBE2V2Q15819 145 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 CCL15Q16663 113 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 UBXN11Q5T124 520 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 DCST1Q5T197 706 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 HENMT1Q5T8I9 393 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 GGNBP1Q5YKI7 109 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 GDPD4Q6W3E5 623 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 VRK2Q86Y07 508 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 JAGN1Q8N5M9 183 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 Q8NFD4 153 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 SEMA6DQ8NFY4 1073 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR2A12Q8NGT7 310 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR6N1Q8NGY5 312 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 MAL2Q969L2 176 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 AKR1E2Q96JD6 320 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 MRGPRX3Q96LB0 322 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR2M4Q96R27 311 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 MICU1Q9BPX6 476 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 SLC25A51Q9H1U9 297 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 C1orf198Q9H425 327 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 RGCCQ9H4X1 137 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 ASB8Q9H765 288 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 FBXW11Q9UKB1 542 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 GPR55Q9Y2T6 319 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 HDGFL3Q9Y3E1 203 aa8.15□□□□□ -1.1
CDC42BPA-206ENST00000429440 SMIM28A0A1B0GU29 152 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 LDB2O43679 373 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR10H3O60404 316 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 TMEM127O75204 238 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 RPP14O95059 124 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 PMS2P2O95744 297 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 GCGP01275 180 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OPN1SWP03999 348 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OPN1MWP04001 364 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 F13BP05160 661 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 HLA-DQB2P05538 268 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 SMIM10L2AP0DMW4 78 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 SMIM10L2BP0DMW5 78 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OPN1MW2P0DN77 364 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OPN1MW3P0DN78 364 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 TBPP20226 339 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 CD80P33681 288 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 WNT5AP41221 380 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 RBM34P42696 430 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 NDUFV1P49821 464 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 ST8SIA6P61647 398 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 FOXK1P85037 733 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 RAB35Q15286 201 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 MOGAT2Q3SYC2 334 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 LEMD1Q68G75 181 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 ZNF774Q6NX45 483 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 PGBD2Q6P3X8 592 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms