RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 HOXD1Q9GZZ0 328 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 GORASP2Q9H8Y8 452 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 GNB4Q9HAV0 340 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 PDFQ9HBH1 243 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 MYNNQ9NPC7 610 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ACP6Q9NPH0 428 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 DIABLOQ9NR28 239 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 PKD2L2Q9NZM6 624 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAM153AQ9UHL3 310 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 KCNK6Q9Y257 313 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 PPIL1Q9Y3C6 166 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 WIPI2Q9Y4P8 454 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 USH1CQ9Y6N9 552 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 NCOA6Q14686 2063 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ACANP16112 2415 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 TLCD2A6NGC4 264 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 TRPC5OSA6NMA1 111 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 PDZK1P1A8MUH7 402 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 A8MV72 311 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 A8MXK9 166 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 MIF4GDA9UHW6 222 aaKnown RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SRRM5B3KS81 715 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 RASGRF2O14827 1237 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 TFECO14948 347 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 PGLSO95336 258 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 LSM8O95777 96 aaKnown RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SOD1P00441 154 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 IL6P05231 212 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 RPS17P08708 135 aaKnown RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 ANPEPP15144 967 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 HLA-DPA1P20036 260 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 KLK2P20151 261 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 PDHA2P29803 388 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 BMI1P35226 326 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 RORAP35398 523 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SOX3P41225 446 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 RGRP47804 291 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 GSSP48637 474 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 EIF2B2P49770 351 aaKnown RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 HNMTP50135 292 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 NDUFA8P51970 172 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 TPI1P60174 286 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 GNGT1P63211 74 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 FOLH1Q04609 750 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF33BQ06732 778 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 C2orf54Q08AI8 447 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SCARB2Q14108 478 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 CAPRIN1Q14444 709 aaKnown RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 TAB1Q15750 504 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 DPYSL2Q16555 572 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 EXOC3L4Q17RC7 722 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 CCDC58Q4VC31 144 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 HIGD2BQ4VC39 106 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 MLIPQ5VWP3 458 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 LRRC66Q68CR7 880 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SCYL2Q6P3W7 929 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 CASC4Q6P4E1 433 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 GDPGP1Q6ZNW5 385 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 IDO2Q6ZQW0 420 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 CHMP1BQ7LBR1 199 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 BIVMQ86UB2 503 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 C11orf53Q8IXP5 236 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 IFT20Q8IY31 132 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC38A6Q8IZM9 456 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SYCE1Q8N0S2 351 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 LPCAT1Q8NF37 534 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 OR7A2PQ8NGA2 310 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 OR4K1Q8NGD4 311 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 CLHC1Q8NHS4 586 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZPLD1Q8TCW7 415 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAM172AQ8WUF8 416 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 NELFBQ8WX92 580 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 RXFP2Q8WXD0 754 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 TMCO6Q96DC7 493 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 RMND5BQ96G75 393 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 MCCC1Q96RQ3 725 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 MAP3K3Q99759 626 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC39A8Q9C0K1 460 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 CXXC4Q9H2H0 198 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 C10orf88Q9H8K7 445 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 VIPAS39Q9H9C1 493 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAM114A2Q9NRY5 505 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SAMSN1Q9NSI8 373 aaKnown RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 HRASLS2Q9NWW9 162 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 SEC14L3Q9UDX4 400 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 CD84Q9UIB8 345 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 PACSIN2Q9UNF0 486 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 CHKBQ9Y259 395 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 AP3M1Q9Y2T2 418 aa3.84□□□□□ -1.79
HMGB3P5-201ENST00000428894 PCM1Q15154 2024 aa3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 INTS1Q8N201 2190 aaKnown RBP3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 CSPG4Q6UVK1 2322 aa3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 TRIM49BA6NDI0 452 aa3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 C2orf74A8MZ97 194 aa3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 E7EQ34 232 aa3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 H7C0C1 242 aa3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 K7EPI3 171 aa3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 NDUFS8O00217 210 aa3.83□□□□□ -1.8
HMGB3P5-201ENST00000428894 NOS1APO75052 506 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms