RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MS4A18Q3C1V0 323 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 GCNT6Q5T4J0 391 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 FAM69AQ5T7M9 428 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 ZCCHC24Q8N2G6 241 aaKnown RBP13.46□□□□□ -0.25
SEC13-210ENST00000428626 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 SPDL1Q96EA4 605 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 FOXN4Q96NZ1 517 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 KCNK17Q96T54 332 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 SOX7Q9BT81 388 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 PLK3Q9H4B4 646 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 RAD21L1Q9H4I0 556 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 C12orf10Q9HB07 376 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 NOX3Q9HBY0 568 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 GMEB1Q9Y692 573 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 TMEM129A0AVI4 362 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 C5orf58C9J3I9 102 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 LRRN3E7EW58 273 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 BGLAPP02818 100 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 CSF3P09919 207 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 BMP4P12644 408 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 CBR1P16152 277 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 IGFBP5P24593 272 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 THBS4P35443 961 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 NR4A2P43354 598 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 PDLIM4P50479 330 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 IDH3GP51553 393 aaPredicted RBP13.45□□□□□ -0.26
SEC13-210ENST00000428626 SNRPD2P62316 118 aaKnown RBP13.45□□□□□ -0.26
SEC13-210ENST00000428626 CDK6Q00534 326 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 GGTLC2Q14390 218 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 EFNB3Q15768 340 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 MSMPQ1L6U9 139 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 C3orf36Q3SXR2 165 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 ALG10BQ5I7T1 473 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 CYB5R2Q6BCY4 276 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 REEP3Q6NUK4 255 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 H1FNTQ75WM6 255 aaPredicted RBP13.45□□□□□ -0.26
SEC13-210ENST00000428626 FAM169BQ8N8A8 192 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 SLC38A4Q969I6 547 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 MSI2Q96DH6 328 aaKnown RBP13.45□□□□□ -0.26
SEC13-210ENST00000428626 SLC41A3Q96GZ6 507 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 MOGAT1Q96PD6 335 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 ZNF317Q96PQ6 595 aaPredicted RBP13.45□□□□□ -0.26
SEC13-210ENST00000428626 VRK1Q99986 396 aaPredicted RBP13.45□□□□□ -0.26
SEC13-210ENST00000428626 EMC6Q9BV81 110 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
SEC13-210ENST00000428626 CACYBPQ9HB71 228 aaKnown RBP13.45□□□□□ -0.26
SEC13-210ENST00000428626 CRLF2Q9HC73 371 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 RPS6KB2Q9UBS0 482 aa13.45□□□□□ -0.26
SEC13-210ENST00000428626 TRAV36DV7A0A075B6V5 113 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 A0A087WUJ7 227 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 IGHV2OR16-5A0A0B4J2B6 119 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 A0A0B4J2E0 115 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 LOC102725191A0A1B0GVB3 256 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 A0A1B0GX12 115 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 B9A039 149 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 AIM2O14862 343 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 POLR3GO15318 223 aaPredicted RBP13.44□□□□□ -0.26
SEC13-210ENST00000428626 PHF1O43189 567 aaPredicted RBP13.44□□□□□ -0.26
SEC13-210ENST00000428626 OR2T1O43869 369 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 SLC43A1O75387 559 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 PDE5AO76074 875 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 GPX2P18283 190 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 GTF2E2P29084 291 aaKnown RBP13.44□□□□□ -0.26
SEC13-210ENST00000428626 AQP1P29972 269 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 SH3BGRP55822 239 aaPredicted RBP13.44□□□□□ -0.26
SEC13-210ENST00000428626 STX1BP61266 288 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 OR1Q1Q15612 314 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 DLEU7Q6UYE1 221 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 IL17RELQ6ZVW7 336 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 SLC46A3Q7Z3Q1 461 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 MDP1Q86V88 176 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 ANKK1Q8NFD2 765 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 NUP37Q8NFH4 326 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 TXNDC15Q96J42 360 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 KCNS3Q9BQ31 491 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 MED29Q9NX70 200 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 CDC42EP3Q9UKI2 254 aa13.44□□□□□ -0.26
SEC13-210ENST00000428626 M0R3G1 203 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 LMX1BO60663 402 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 TGDSO95455 350 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 IFNA2P01563 188 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
SEC13-210ENST00000428626 AQP5P55064 265 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 SRSF2Q01130 221 aaKnown RBP13.43□□□□□ -0.26
SEC13-210ENST00000428626 NPRL3Q12980 569 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 C1DQ13901 141 aaKnown RBP13.43□□□□□ -0.26
SEC13-210ENST00000428626 SCARB2Q14108 478 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 CARTPTQ16568 116 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 AGKQ53H12 422 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 AGBL2Q5U5Z8 902 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 CARD17Q5XLA6 110 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 ULK3Q6PHR2 472 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 PTOV1Q86YD1 416 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 C20orf196Q8IYI0 205 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 GPR137CQ8N3F9 429 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 SVOPLQ8N434 492 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 ADPRHL1Q8NDY3 354 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 DNAJA4Q8WW22 397 aaPredicted RBP13.43□□□□□ -0.26
SEC13-210ENST00000428626 ZNF75AQ96N20 296 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms