RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 ERICH5Q6P6B1 374 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 KLHL17Q6TDP4 642 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 LINC00114Q6XXX2 140 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 WDR88Q6ZMY6 472 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 DEF8Q6ZN54 512 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 H1FNTQ75WM6 255 aaPredicted RBP8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SPATA21Q7Z572 469 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ABHD12BQ7Z5M8 362 aaPredicted RBP8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TSPYL5Q86VY4 417 aaPredicted RBP8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CARM1Q86X55 608 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 C17orf78Q8N4C9 275 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ZNF611Q8N823 705 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 OR2T12Q8NG77 320 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ADAMTS16Q8TE57 1224 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 FBXW5Q969U6 566 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 MOGAT1Q96PD6 335 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TMEM43Q9BTV4 400 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 C1QTNF6Q9BXI9 259 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ASPNQ9BXN1 380 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 AMBRA1Q9C0C7 1298 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CXorf56Q9H5V9 222 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 EVA1AQ9H8M9 152 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 POU2F3Q9UKI9 436 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 RCE1Q9Y256 329 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 B3GALT5Q9Y2C3 310 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CORINQ9Y5Q5 1042 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 HIVEP1P15822 2718 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 MPDZO75970 2070 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CELSR1Q9NYQ6 3014 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PRRC2AP48634 2157 aaKnown RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TRAPPC13A5PLN9 417 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SHISA9B4DS77 424 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 LRRN3E7EW58 273 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ARHGEF9O43307 516 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TRAF3IP2O43734 574 aaPredicted RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 AKAP8O43823 692 aaKnown RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SHOX2O60902 331 aaPredicted RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 UPK3AO75631 287 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 HPRP00739 348 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 BGLAPP02818 100 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 THY1P04216 161 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SOD3P08294 240 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 COX4I1P13073 169 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CD40P25942 277 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PTH2RP49190 550 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 NUDT2P50583 147 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SEC24CP53992 1094 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 RPS4XP62701 263 aaKnown RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ROR2Q01974 943 aaKnown RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 POU3F1Q03052 451 aaPredicted RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PMS2P3Q13401 168 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MFSD13AQ14CX5 517 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TBRG1Q3YBR2 411 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ZNF672Q499Z4 452 aaPredicted RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CARD17Q5XLA6 110 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 HMBOX1Q6NT76 420 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TMEM108Q6UXF1 575 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CCDC80Q76M96 950 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ARPINQ7Z6K5 226 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TREML1Q86YW5 311 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 UEVLDQ8IX04 471 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 LRRC75A-AS1Q8N1F1 130 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SCAIQ8N9R8 606 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 WDR31Q8NA23 367 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ADPRHL1Q8NDY3 354 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 OR6S1Q8NH40 331 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 LILRB1Q8NHL6 650 aaPredicted RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 RP9Q8TA86 221 aaKnown RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 RASSF5Q8WWW0 418 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ZNF583Q96ND8 569 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MUS81Q96NY9 551 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 OXGR1Q96P68 337 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ELAC2Q9BQ52 826 aaKnown RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 NSRP1Q9H0G5 558 aaKnown RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SLC17A5Q9NRA2 495 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CMTM6Q9NX76 183 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MRPL39Q9NYK5 338 aaKnown RBP8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 BAG5Q9UL15 447 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SLC7A7Q9UM01 511 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 LAMP3Q9UQV4 416 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 AMDHD2Q9Y303 409 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SH3GLB1Q9Y371 365 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MTORP42345 2549 aa8.08□□□□□ -1.12
RFX3-AS1-202ENST00000427722 A0A096LPE4 126 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 A0A1W2PPZ6 126 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 OR6C65A6NJZ3 312 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 M0R3G1 203 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SLC43A1O75387 559 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ZNF432O94892 652 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 LYPD3O95274 346 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MT-ATP6P00846 226 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 IFNA14P01570 189 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 HLA-DOBP13765 273 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 AHCYP23526 432 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PTAFRP25105 342 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 OR1E2P47887 323 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SLC7A2P52569 658 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ATP5J2P56134 94 aa8.07□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TAS2R41P59536 307 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms