RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CMTM5Q96DZ9 223 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 MUS81Q96NY9 551 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 PCDHAC1Q9H158 963 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 CXXC4Q9H2H0 198 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 ALG2Q9H553 416 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 ESRP2Q9H6T0 727 aaKnown RBP13.05□□□□□ -0.32
RTN4-210ENST00000427710 NGBQ9NPG2 151 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 SLC17A5Q9NRA2 495 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 ARL8BQ9NVJ2 186 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 MED29Q9NX70 200 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 RIMS3Q9UJD0 308 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 B3GALT5Q9Y2C3 310 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 ARFGEF3Q5TH69 2177 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 ZNF587BE7ETH6 402 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 J3KTA2 159 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 M0R1B8 84 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 PLPP3O14495 311 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 HS3ST1O14792 307 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 ZNF432O94892 652 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 ZNF682O95780 498 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 IFNA14P01570 189 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 AHCYP23526 432 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 PRDX6P30041 224 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 TUBA1BP68363 451 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 TUBA4AP68366 448 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 POU3F1Q03052 451 aaPredicted RBP13.04□□□□□ -0.32
RTN4-210ENST00000427710 ZNF74Q16587 644 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 SPNS3Q6ZMD2 512 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 TUBA1AQ71U36 451 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 ADPRHL1Q8NDY3 354 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 OR5J2Q8NH18 312 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 OR6S1Q8NH40 331 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 TMEM255BQ8WV15 326 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 ZNF837Q96EG3 531 aaPredicted RBP13.04□□□□□ -0.32
RTN4-210ENST00000427710 ALPK1Q96QP1 1244 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 KCTD14Q9BQ13 255 aaPredicted RBP13.04□□□□□ -0.32
RTN4-210ENST00000427710 USB1Q9BQ65 265 aaKnown RBP13.04□□□□□ -0.32
RTN4-210ENST00000427710 AMBRA1Q9C0C7 1298 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 MEPEQ9NQ76 525 aaPredicted RBP13.04□□□□□ -0.32
RTN4-210ENST00000427710 MRPL39Q9NYK5 338 aaKnown RBP13.04□□□□□ -0.32
RTN4-210ENST00000427710 ADA2Q9NZK5 511 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 EGFL7Q9UHF1 273 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 AP3M1Q9Y2T2 418 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 ARL2BPQ9Y2Y0 163 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 SNX13Q9Y5W8 968 aa13.04□□□□□ -0.32
RTN4-210ENST00000427710 A0A096LPE4 126 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 A0A1W2PPZ6 126 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 ABCD4O14678 606 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 PIP5K1CO60331 668 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 SLC43A1O75387 559 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 SEC14L2O76054 403 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 SERPINA1P01009 418 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 ADORA3P0DMS8 318 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 UMPSP11172 480 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 SELENOWP63302 87 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 ROR2Q01974 943 aaKnown RBP13.03□□□□□ -0.32
RTN4-210ENST00000427710 PUDPQ08623 228 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 CAMK2DQ13557 499 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 MFSD13AQ14CX5 517 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 OR7E24Q6IFN5 339 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 NHLRC1Q6VVB1 395 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 SLC46A3Q7Z3Q1 461 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 P2RY8Q86VZ1 359 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 MEX3DQ86XN8 651 aaKnown RBP13.03□□□□□ -0.32
RTN4-210ENST00000427710 SCAIQ8N9R8 606 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 FAM156AQ8NDB6 213 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 OR1K1Q8NGR3 316 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 FAM162AQ96A26 154 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 OR2M2Q96R28 347 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 BEX4Q9NWD9 120 aaPredicted RBP13.03□□□□□ -0.32
RTN4-210ENST00000427710 RHCGQ9UBD6 479 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 A4GNTQ9UNA3 340 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 CORINQ9Y5Q5 1042 aa13.03□□□□□ -0.32
RTN4-210ENST00000427710 SLC35F4A4IF30 521 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 SHISA9B4DS77 424 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 M0R3G1 203 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 SMPD2O60906 423 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 OR5F1O95221 314 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 ADAM8P78325 824 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 LSM11P83369 360 aaKnown RBP eCLIP13.02□□□□□ -0.33
RTN4-210ENST00000427710 ARF1P84077 181 aaKnown RBP13.02□□□□□ -0.33
RTN4-210ENST00000427710 TGFBR3Q03167 851 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 TBRG1Q3YBR2 411 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 ZNF672Q499Z4 452 aaPredicted RBP13.02□□□□□ -0.33
RTN4-210ENST00000427710 HMBOX1Q6NT76 420 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 KRTAP1-3Q8IUG1 177 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 TMEM123Q8N131 208 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 WFDC11Q8NEX6 87 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 PERPQ96FX8 193 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 MPP4Q96JB8 637 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 HSH2DQ96JZ2 352 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 CCT8L2Q96SF2 557 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 LINC00470Q9BZP3 86 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 NELFAQ9H3P2 528 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 GPR35Q9HC97 309 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 NANSQ9NR45 359 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms