RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TAF13Q15543 124 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 TEAD2Q15562 447 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 UBE2V2Q15819 145 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 CPSF6Q16630 551 aaKnown RBP eCLIP5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 PCGF3Q3KNV8 242 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 SLC10A6Q3KNW5 377 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ACSM3Q53FZ2 586 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ACTBL2Q562R1 376 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 AWAT1Q58HT5 328 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 MESTQ5EB52 335 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 C9orf57Q5W0N0 161 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 C18orf63Q68DL7 685 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ARL9Q6T311 187 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 PAQR6Q6TCH4 344 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 MTSS1LQ765P7 747 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 SSX7Q7RTT5 188 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 SLC16A14Q7RTX9 510 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ANKRD33Q7Z3H0 272 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 MON1AQ86VX9 555 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 NUDT13Q86X67 352 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 CDK20Q8IZL9 346 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 C1orf87Q8N0U7 546 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 CPXCR1Q8N123 301 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 PRSS35Q8N3Z0 413 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 BPIFB2Q8N4F0 458 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ARL14EPQ8N8R7 260 aaPredicted RBP5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ZDHHC22Q8N966 263 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 PLPP5Q8NEB5 264 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 CHST13Q8NET6 341 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR8G5Q8NG78 346 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR2L3Q8NG85 312 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR4K5Q8NGD3 323 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR10A7Q8NGE5 316 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR5AP2Q8NGF4 316 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR6T1Q8NGN1 323 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR10D4PQ8NGN7 298 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR52I2Q8NH67 350 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR5AK2Q8NH90 309 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 FIBINQ8TAL6 211 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 POC1BQ8TC44 478 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ADAMTS17Q8TE56 1095 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 METTL21AQ8WXB1 218 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 PIGKQ92643 395 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 CLP1Q92989 425 aaKnown RBP5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 UBE2E3Q969T4 207 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 VOPP1Q96AW1 172 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 RSPRY1Q96DX4 576 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 MISP3Q96FF7 219 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 WDR89Q96FK6 387 aaPredicted RBP5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 RHOVQ96L33 236 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 SAMD8Q96LT4 415 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 PACRGQ96M98 296 aaPredicted RBP5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ZNF385AQ96PM9 386 aaKnown RBP5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 F2RL3Q96RI0 385 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 PKP4Q99569 1192 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 PCGF1Q9BSM1 259 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 NMES1Q9C002 83 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ATXN3LQ9H3M9 355 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 DPEP2Q9H4A9 486 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 FKRPQ9H9S5 495 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 MYOZ2Q9NPC6 264 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 TMEM184CQ9NVA4 438 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 GPATCH2Q9NW75 528 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ARL15Q9NXU5 204 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 AHSPQ9NZD4 102 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 LUZP4Q9P127 313 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 MTFP1Q9UDX5 166 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR52A1Q9UKL2 312 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 FBXW2Q9UKT8 454 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 NOD1Q9Y239 953 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 ASF1AQ9Y294 204 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 YARS2Q9Y2Z4 477 aaKnown RBP5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 NOP16Q9Y3C1 178 aaKnown RBP5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 FAM96BQ9Y3D0 163 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 WDR81Q562E7 1941 aa5.17□□□□□ -1.58
VTI1BP4-201ENST00000427516 TRBV6-7A0A0A0MS04 114 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 BORCS7-ASMTA0A0B4J1R7 106 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 A0A0G2JK05 382 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 TRBV4-1A0A0J9YWV2 114 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 A6NIZ1 184 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 A6NLC8 198 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 IFITM5A6NNB3 132 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 ZNF726A6NNF4 738 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 RIIAD1A6NNX1 92 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 HSPB2A8KAH6 182 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 A8MXE2 369 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 CDRT15L2A8MXV6 281 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 IDSB3KWA1 339 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 H0YIV9 168 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 PYCARD-AS1I3L0S3 204 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 K7ERQ8 282 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 CYR61O00622 381 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 ATXN7O15265 892 aaPredicted RBP5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 OGG1O15527 345 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 XRCC3O43542 346 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 CDC40O60508 579 aaKnown RBP eCLIP5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 SRPX2O60687 465 aaPredicted RBP5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 LRATO95237 230 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 OPN1SWP03999 348 aa5.16□□□□□ -1.58
VTI1BP4-201ENST00000427516 EDN1P05305 212 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms