RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PIK3C3Q8NEB9 887 aa16.12■□□□□ 0.17
GPC1-205ENST00000427506 RASSF5Q8WWW0 418 aa16.12■□□□□ 0.17
GPC1-205ENST00000427506 LRRC58Q96CX6 371 aa16.12■□□□□ 0.17
GPC1-205ENST00000427506 POM121Q96HA1 1249 aa16.12■□□□□ 0.17
GPC1-205ENST00000427506 HS6ST2Q96MM7 605 aa16.12■□□□□ 0.17
GPC1-205ENST00000427506 TMEM43Q9BTV4 400 aa16.12■□□□□ 0.17
GPC1-205ENST00000427506 SAR1AQ9NR31 198 aa16.12■□□□□ 0.17
GPC1-205ENST00000427506 SETD2Q9BYW2 2564 aaPredicted RBP16.12■□□□□ 0.17
GPC1-205ENST00000427506 VPS13CQ709C8 3753 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 A0A096LPE4 126 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 LOC100653049A0A140TA62 436 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 A0A1W2PPZ6 126 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 BBIP1A8MTZ0 92 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 CHP2O43745 196 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 KRT34O76011 436 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 BGLAPP02818 100 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 SH3BGRP55822 239 aaPredicted RBP16.11■□□□□ 0.17
GPC1-205ENST00000427506 TNK1Q13470 666 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 NPTX1Q15818 432 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 COQ5Q5HYK3 327 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 ANKRD16Q6P6B7 361 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 SNX32Q86XE0 403 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 RBM45Q8IUH3 476 aaKnown RBP16.11■□□□□ 0.17
GPC1-205ENST00000427506 MUC15Q8N387 334 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 SCAIQ8N9R8 606 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 OR8J3Q8NGG0 315 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 BCL2L2Q92843 193 aaPredicted RBP16.11■□□□□ 0.17
GPC1-205ENST00000427506 TAMM41Q96BW9 452 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 BOD1Q96IK1 185 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 MOGAT1Q96PD6 335 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 KCNS3Q9BQ31 491 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 GRIP2Q9C0E4 1043 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 CBLN4Q9NTU7 201 aa16.11■□□□□ 0.17
GPC1-205ENST00000427506 LOC102725191A0A1B0GVB3 256 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 LRRN3E7EW58 273 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 MS4A18H0YCH9 400 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 ZNF432O94892 652 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 NPPAP01160 153 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 CD247P20963 164 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 AHCYP23526 432 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 PAX7P23759 505 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 ACVR1BP36896 505 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 GZMMP51124 257 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 ARF1P84077 181 aaKnown RBP16.1■□□□□ 0.17
GPC1-205ENST00000427506 POU3F1Q03052 451 aaPredicted RBP16.1■□□□□ 0.17
GPC1-205ENST00000427506 MS4A18Q3C1V0 323 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 CARD17Q5XLA6 110 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 TTC33Q6PID6 262 aaPredicted RBP16.1■□□□□ 0.17
GPC1-205ENST00000427506 B3GLCTQ6Y288 498 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 PCYOX1LQ8NBM8 494 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 OR4D11Q8NGI4 311 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 ADAMTS16Q8TE57 1224 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 PROX1Q92786 737 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 SLC41A3Q96GZ6 507 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 ADAD1Q96M93 576 aaKnown RBP16.1■□□□□ 0.17
GPC1-205ENST00000427506 OR2M2Q96R28 347 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 CACNG6Q9BXT2 260 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 BARX1Q9HBU1 254 aaPredicted RBP16.1■□□□□ 0.17
GPC1-205ENST00000427506 GPR35Q9HC97 309 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 GID8Q9NWU2 228 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 MRPL39Q9NYK5 338 aaKnown RBP16.1■□□□□ 0.17
GPC1-205ENST00000427506 GDF2Q9UK05 429 aaPredicted RBP16.1■□□□□ 0.17
GPC1-205ENST00000427506 SLC7A7Q9UM01 511 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 MOKQ9UQ07 419 aa16.1■□□□□ 0.17
GPC1-205ENST00000427506 TRAPPC13A5PLN9 417 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 ATP6V1G2-DDX39BF2Z307 99 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 RPL36A-HNRNPH2H7BZ11 118 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 M0R3G1 203 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 TRAF3IP2O43734 574 aaPredicted RBP16.09■□□□□ 0.17
GPC1-205ENST00000427506 NDUFS7O75251 213 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 SERPINI2O75830 405 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 OR6A2O95222 327 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 HPRP00739 348 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 MT-ATP6P00846 226 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 IGHV4-39P01824 125 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 HLA-DOBP13765 273 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 HOXB4P17483 251 aaPredicted RBP16.09■□□□□ 0.17
GPC1-205ENST00000427506 TUBA1BP68363 451 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 TUBA4AP68366 448 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 PUDPQ08623 228 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 CEACAM16Q2WEN9 425 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 ZNF544Q6NX49 715 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 TUBA1AQ71U36 451 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 CCDC80Q76M96 950 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 ANKK1Q8NFD2 765 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 MAGEE2Q8TD90 523 aaPredicted RBP16.09■□□□□ 0.17
GPC1-205ENST00000427506 ZNF317Q96PQ6 595 aaPredicted RBP16.09■□□□□ 0.17
GPC1-205ENST00000427506 SLC38A2Q96QD8 506 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 EMC6Q9BV81 110 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 CRLF2Q9HC73 371 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 MED4Q9NPJ6 270 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 SH3GLB1Q9Y371 365 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 NOX1Q9Y5S8 564 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 CAPN7Q9Y6W3 813 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 USF3Q68DE3 2245 aa16.09■□□□□ 0.17
GPC1-205ENST00000427506 ARPC4-TTLL3A0A0A6YYG9 625 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 IGHV1-18A0A0C4DH31 117 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 ZNF726A6NNF4 738 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 FXYD1O00168 92 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 PLPP3O14495 311 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms