RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 FN1P02751 2386 aaKnown RBP18.8■□□□□ 0.6
CDCP1-202ENST00000425231 TRAF3IP2O43734 574 aaPredicted RBP18.8■□□□□ 0.6
CDCP1-202ENST00000425231 HPRP00739 348 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 CD247P20963 164 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 ACVR1BP36896 505 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 ARFIP2P53365 341 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 CRYBA2P53672 197 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 C1DQ13901 141 aaKnown RBP18.8■□□□□ 0.6
CDCP1-202ENST00000425231 CYLC2Q14093 348 aaPredicted RBP18.8■□□□□ 0.6
CDCP1-202ENST00000425231 NHLRC1Q6VVB1 395 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 PATL1Q86TB9 770 aaKnown RBP18.8■□□□□ 0.6
CDCP1-202ENST00000425231 RBM45Q8IUH3 476 aaKnown RBP18.8■□□□□ 0.6
CDCP1-202ENST00000425231 MUC15Q8N387 334 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 MAGEE2Q8TD90 523 aaPredicted RBP18.8■□□□□ 0.6
CDCP1-202ENST00000425231 TAMM41Q96BW9 452 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 MOGAT1Q96PD6 335 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 CORINQ9Y5Q5 1042 aa18.8■□□□□ 0.6
CDCP1-202ENST00000425231 ALPK2Q86TB3 2170 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 TLN2Q9Y4G6 2542 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 ARPC4-TTLL3A0A0A6YYG9 625 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 FXYD1O00168 92 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 SLC43A1O75387 559 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 THY1P04216 161 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 HLA-DOBP13765 273 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 FABP6P51161 128 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 SF3A3Q12874 501 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDCP1-202ENST00000425231 KLF10Q13118 480 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 VEZF1Q14119 521 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 VMACQ2NL98 169 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 RABL3Q5HYI8 236 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 ENTPD8Q5MY95 495 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 HMBOX1Q6NT76 420 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 ZNF544Q6NX49 715 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 ANKRD16Q6P6B7 361 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 TSPYL5Q86VY4 417 aaPredicted RBP18.79■□□□□ 0.6
CDCP1-202ENST00000425231 TMEM123Q8N131 208 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 FBXL14Q8N1E6 418 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 SCAIQ8N9R8 606 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 LRRC58Q96CX6 371 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 ZNF837Q96EG3 531 aaPredicted RBP18.79■□□□□ 0.6
CDCP1-202ENST00000425231 ZNF317Q96PQ6 595 aaPredicted RBP18.79■□□□□ 0.6
CDCP1-202ENST00000425231 OR2M2Q96R28 347 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 FKRPQ9H9S5 495 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 SAR1AQ9NR31 198 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 MOKQ9UQ07 419 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 ATP23Q9Y6H3 246 aa18.79■□□□□ 0.6
CDCP1-202ENST00000425231 A0A096LPE4 126 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 IGHV1-18A0A0C4DH31 117 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 A0A1W2PPZ6 126 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 LRRN3E7EW58 273 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 CHP2O43745 196 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 LYPD3O95274 346 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 NQO1P15559 274 aaKnown RBP18.78■□□□□ 0.6
CDCP1-202ENST00000425231 SH3BGRP55822 239 aaPredicted RBP18.78■□□□□ 0.6
CDCP1-202ENST00000425231 COQ5Q5HYK3 327 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 INTS11Q5TA45 600 aaKnown RBP18.78■□□□□ 0.6
CDCP1-202ENST00000425231 WDR88Q6ZMY6 472 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 CCDC80Q76M96 950 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 CALHM3Q86XJ0 350 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 ASPNQ9BXN1 380 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 CACNG6Q9BXT2 260 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 GPR35Q9HC97 309 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 MRGBPQ9NV56 204 aa18.78■□□□□ 0.6
CDCP1-202ENST00000425231 MRPL39Q9NYK5 338 aaKnown RBP18.78■□□□□ 0.6
CDCP1-202ENST00000425231 CPSF4LA6NMK7 179 aaKnown RBP18.77■□□□□ 0.6
CDCP1-202ENST00000425231 ATP6V1G2-DDX39BF2Z307 99 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 NPPAP01160 153 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 HOXB1P14653 301 aaPredicted RBP18.77■□□□□ 0.6
CDCP1-202ENST00000425231 PAX7P23759 505 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 ARF1P84077 181 aaKnown RBP18.77■□□□□ 0.6
CDCP1-202ENST00000425231 IL1RL1Q01638 556 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 PHYHD1Q5SRE7 291 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 UEVLDQ8IX04 471 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 PIK3C3Q8NEB9 887 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 OR8J3Q8NGG0 315 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 VANGL1Q8TAA9 524 aaPredicted RBP18.77■□□□□ 0.6
CDCP1-202ENST00000425231 ADAMTS16Q8TE57 1224 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 HS6ST2Q96MM7 605 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 SLC38A2Q96QD8 506 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 SH3GL1Q99961 368 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 PCDHAC1Q9H158 963 aa18.77■□□□□ 0.6
CDCP1-202ENST00000425231 BARX1Q9HBU1 254 aaPredicted RBP18.77■□□□□ 0.6
CDCP1-202ENST00000425231 CRNNQ9UBG3 495 aaPredicted RBP18.77■□□□□ 0.6
CDCP1-202ENST00000425231 RNF223E7ERA6 249 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 PLPP3O14495 311 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 VIMP08670 466 aaKnown RBP18.76■□□□□ 0.59
CDCP1-202ENST00000425231 APOBEC3AP31941 199 aaPredicted RBP18.76■□□□□ 0.59
CDCP1-202ENST00000425231 UBE2NP61088 152 aaKnown RBP18.76■□□□□ 0.59
CDCP1-202ENST00000425231 TUBA1BP68363 451 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 TUBA4AP68366 448 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 GUCY1A3Q02108 690 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 PMS2P3Q13401 168 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 REP15Q6BDI9 236 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 TUBA1AQ71U36 451 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 WDFY1Q8IWB7 410 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 GPR137CQ8N3F9 429 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 SLC26A7Q8TE54 656 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 TXNDC15Q96J42 360 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 EMC6Q9BV81 110 aa18.76■□□□□ 0.59
CDCP1-202ENST00000425231 REG4Q9BYZ8 158 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms