RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MARC2Q969Z3 335 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 TSACCQ96A04 125 aaPredicted RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 NKX3-1Q99801 234 aaPredicted RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 FGF22Q9HCT0 170 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 PHPT1Q9NRX4 125 aaPredicted RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 TAS2R10Q9NYW0 307 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 OR5V1Q9UGF6 321 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 FOXJ3Q9UPW0 622 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 MEIS3P1A6NDR6 274 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 CREBL2O60519 120 aaPredicted RBP13.11□□□□□ -0.31
MSH5-206ENST00000423982 RPP14O95059 124 aaKnown RBP13.11□□□□□ -0.31
MSH5-206ENST00000423982 SERPINA3P01011 423 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 NID1P14543 1247 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 IFNGR1P15260 489 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 SOX2P48431 317 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 ZNF626Q68DY1 528 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 LRFN4Q6PJG9 635 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 ENPP7Q6UWV6 458 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 TMUB2Q71RG4 321 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 OVCH1Q7RTY7 1134 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 UBALD2Q8IYN6 164 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 ZNF619Q8N2I2 560 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 OR2L13Q8N349 312 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 RAB42Q8N4Z0 105 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 OR6K6Q8NGW6 343 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 OR2L8Q8NGY9 312 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 SGTBQ96EQ0 304 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 APOOQ9BUR5 198 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 ZNF350Q9GZX5 532 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 IER3IP1Q9Y5U9 82 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 A0A1B0GTH9 108 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 ANKRD20A5PA0PJZ0 165 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 MCIDASD6RGH6 385 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 PDCD5O14737 125 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 PRICKLE3O43900 615 aaPredicted RBP13.11□□□□□ -0.31
MSH5-206ENST00000423982 PRAF2O60831 178 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 IGHV4-34P06331 123 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 GIPP09681 153 aaPredicted RBP13.11□□□□□ -0.31
MSH5-206ENST00000423982 ZNF35P13682 527 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 S100A11P31949 105 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 EPHA4P54764 986 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 SEC61A1P61619 476 aaKnown RBP13.11□□□□□ -0.31
MSH5-206ENST00000423982 ACTC1P68032 377 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 ACTA1P68133 377 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 DHODHQ02127 395 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 KCNAB1Q14722 419 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 GRM7Q14831 915 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 EIPR1Q53HC9 387 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 PWWP2BQ6NUJ5 590 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 RNF113BQ8IZP6 322 aaKnown RBP13.11□□□□□ -0.31
MSH5-206ENST00000423982 OR4E2Q8NGC2 313 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 STK35Q8TDR2 534 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 ZDHHC1Q8WTX9 485 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 NMNAT3Q96T66 252 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 PLEKHA1Q9HB21 404 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 NCDNQ9UBB6 729 aa13.11□□□□□ -0.31
MSH5-206ENST00000423982 A8MXK9 166 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 KDM4BO94953 1096 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 ZFPL1O95159 310 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 SPDEFO95238 335 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 PRKACAP17612 351 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 BAMBIQ13145 260 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 RUNX2Q13950 521 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 CBFBQ13951 182 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 YOD1Q5VVQ6 348 aaPredicted RBP13.1□□□□□ -0.31
MSH5-206ENST00000423982 TFAP2EQ6VUC0 442 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 PRSS41Q7RTY9 318 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 SPICQ8N5J4 248 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 COX18Q8N8Q8 333 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 ST8SIA2Q92186 375 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 FAM131CQ96AQ9 280 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 BMFQ96LC9 184 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 CNN2Q99439 309 aaKnown RBP13.1□□□□□ -0.31
MSH5-206ENST00000423982 TEX101Q9BY14 249 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 EXOSC3Q9NQT5 275 aaKnown RBP13.1□□□□□ -0.31
MSH5-206ENST00000423982 TAS2R5Q9NYW4 299 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 MOKQ9UQ07 419 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 ARID1BQ8NFD5 2236 aaPredicted RBP13.1□□□□□ -0.31
MSH5-206ENST00000423982 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 IGHV1OR15-9A0A0B4J2B8 117 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 A0A1B0GWA3 101 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 AIPO00170 330 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 SMAD9O15198 467 aaKnown RBP13.1□□□□□ -0.31
MSH5-206ENST00000423982 HNRNPA2B1P22626 353 aaKnown RBP13.1□□□□□ -0.31
MSH5-206ENST00000423982 EMDP50402 254 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 OR6V1Q8N148 313 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 OR1S1Q8NH92 325 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 ZNF578Q96N58 590 aaPredicted RBP13.1□□□□□ -0.31
MSH5-206ENST00000423982 HAO2Q9NYQ3 351 aa13.1□□□□□ -0.31
MSH5-206ENST00000423982 P2RX6O15547 441 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 RP2O75695 350 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 OR2A4O95047 310 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 APBB3O95704 486 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 PLATP00750 562 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 APOC3P02656 99 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 RLN1P04808 185 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 CEACAM5P06731 702 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 THBS1P07996 1170 aa13.09□□□□□ -0.31
MSH5-206ENST00000423982 TYRP1P17643 537 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms