RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 TRAPPC4Q9Y296 219 aa6.57□□□□□ -1.36
CLCN3P1-201ENST00000423965 SPIN1Q9Y657 262 aaPredicted RBP6.57□□□□□ -1.36
CLCN3P1-201ENST00000423965 TRBV23-1A0A0A0MS06 115 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 GTPBP1O00178 669 aaKnown RBP6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 EIF4E2O60573 245 aaKnown RBP6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 TFPIP10646 304 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 IGLL1P15814 213 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 MSX2P35548 267 aaPredicted RBP6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 TGFBR2P37173 567 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 IER3P46695 156 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 NCBP2P52298 156 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 KRTAP10-11P60412 298 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 PAX2Q02962 417 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 NPRL3Q12980 569 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 IFT88Q13099 833 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 CBFBQ13951 182 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 MOGQ16653 247 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 GKAP1Q5VSY0 366 aaPredicted RBP6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 CLEC6AQ6EIG7 209 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 DHRS7BQ6IAN0 325 aaPredicted RBP6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 METTL2BQ6P1Q9 378 aaKnown RBP6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 RAPH1Q70E73 1250 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 CNGA4Q8IV77 575 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 ZBED8Q8IZ13 594 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 KLHL36Q8N4N3 616 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 CDRT4Q8N9R6 151 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 SNX33Q8WV41 574 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 TMEM234Q8WY98 164 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 EXT2Q93063 718 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 ZNF524Q96C55 264 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 ZG16BQ96DA0 208 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 C16orf58Q96GQ5 468 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 UBXN10Q96LJ8 280 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 SF3B5Q9BWJ5 86 aaKnown RBP6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 TRIM5Q9C035 493 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 NMUR2Q9GZQ4 415 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 DPAGT1Q9H3H5 408 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 NELFAQ9H3P2 528 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 IPPKQ9H8X2 491 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 SAP30LQ9HAJ7 183 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 LMBRD1Q9NUN5 540 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 SLCO1C1Q9NYB5 712 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 GRID1Q9ULK0 1009 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 SLC12A4Q9UP95 1085 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 CACNG2Q9Y698 323 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 USH1CQ9Y6N9 552 aa6.56□□□□□ -1.36
CLCN3P1-201ENST00000423965 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 STARD9Q9P2P6 4700 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 A0A096LPK6 155 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 RNASEK-C17orf49H0YIS7 233 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 TPD52L2O43399 206 aaKnown RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 DUS4LO95620 317 aaKnown RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 MT-ND5P03915 603 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 JUNP05412 331 aaKnown RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 IL3P08700 152 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 PRPS2P11908 318 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 UQCRC2P22695 453 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 LMO1P25800 156 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 APOBEC1P41238 236 aaKnown RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 SLC35A1P78382 337 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 GALK2Q01415 458 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 EGFEM1PQ0D2K5 195 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 MERTKQ12866 999 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 GTF2H2Q13888 395 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 FRG1Q14331 258 aaKnown RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 ESCO2Q56NI9 601 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 RNASEH2BQ5TBB1 312 aaKnown RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 TTC19Q6DKK2 380 aaPredicted RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 GTF2H2CQ6P1K8 395 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 LRIG3Q6UXM1 1119 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 ZNF771Q7L3S4 317 aaPredicted RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 ISCA2Q86U28 154 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 MDP1Q86V88 176 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 LDLRAD3Q86YD5 345 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 NAT8LQ8N9F0 302 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 ZIC4Q8N9L1 334 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 SPERTQ8NA61 448 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 CPEB3Q8NE35 698 aaKnown RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 Q8NFD4 153 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 MAIP1Q8WWC4 291 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 RAB40AQ8WXH6 277 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 R3HDM4Q96D70 268 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 QRSL1Q9H0R6 528 aaKnown RBP6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 MMP28Q9H239 520 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 TOR3AQ9H497 397 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 RHOJQ9H4E5 214 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 BRF2Q9HAW0 419 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 ACER3Q9NUN7 267 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 TAS2R7Q9NYW3 318 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 TMEM181Q9P2C4 612 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 NPTNQ9Y639 398 aa6.55□□□□□ -1.36
CLCN3P1-201ENST00000423965 IGLV3-9A0A075B6K5 115 aa6.54□□□□□ -1.36
CLCN3P1-201ENST00000423965 KIR2DS1A0A191URI9 304 aa6.54□□□□□ -1.36
CLCN3P1-201ENST00000423965 SUPT3HB4E1H0 165 aa6.54□□□□□ -1.36
CLCN3P1-201ENST00000423965 F5H0A9 414 aaPredicted RBP6.54□□□□□ -1.36
CLCN3P1-201ENST00000423965 RPL36A-HNRNPH2H7BZ11 118 aa6.54□□□□□ -1.36
CLCN3P1-201ENST00000423965 UBXN8O00124 270 aa6.54□□□□□ -1.36
CLCN3P1-201ENST00000423965 ANKRD28O15084 1053 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms