RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TNFRSF1BP20333 461 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 RBM34P42696 430 aaKnown RBP9.63□□□□□ -0.87
USP49-204ENST00000423567 OR1E2P47887 323 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 MNAT1P51948 309 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 MXRA7P84157 204 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 POU3F1Q03052 451 aaPredicted RBP9.63□□□□□ -0.87
USP49-204ENST00000423567 PUDPQ08623 228 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 GABRA6Q16445 453 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 NCMAPQ5T1S8 102 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 C1QTNF12Q5T7M4 302 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 GKAP1Q5VSY0 366 aaPredicted RBP9.63□□□□□ -0.87
USP49-204ENST00000423567 C8orf82Q6P1X6 216 aaPredicted RBP9.63□□□□□ -0.87
USP49-204ENST00000423567 FKBP9P1Q75LS8 142 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 GPR137CQ8N3F9 429 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 PIK3C3Q8NEB9 887 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 OR5J2Q8NH18 312 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 OR52N5Q8NH56 324 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 GEMIN6Q8WXD5 167 aaKnown RBP9.63□□□□□ -0.87
USP49-204ENST00000423567 PIGTQ969N2 578 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 MBD6Q96DN6 1003 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 HS6ST2Q96MM7 605 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 MUS81Q96NY9 551 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 MOGAT1Q96PD6 335 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 ALKBH3Q96Q83 286 aaPredicted RBP9.63□□□□□ -0.87
USP49-204ENST00000423567 ALPK1Q96QP1 1244 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 CCT8L2Q96SF2 557 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 LINC00470Q9BZP3 86 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 FKRPQ9H9S5 495 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 NANSQ9NR45 359 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 ABCD2Q9UBJ2 740 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 TAGLN3Q9UI15 199 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 RPS6KA6Q9UK32 745 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 AMDHD2Q9Y303 409 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 NOX1Q9Y5S8 564 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 MAGED1Q9Y5V3 778 aaPredicted RBP9.63□□□□□ -0.87
USP49-204ENST00000423567 ZNF726A6NNF4 738 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 PDLIM1O00151 329 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 SHOX2O60902 331 aaPredicted RBP9.62□□□□□ -0.87
USP49-204ENST00000423567 SERPINI2O75830 405 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 WNT11O96014 354 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 SERPINA1P01009 418 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 ADORA3P0DMS8 318 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 LOXP28300 417 aaPredicted RBP9.62□□□□□ -0.87
USP49-204ENST00000423567 SH3BGRP55822 239 aaPredicted RBP9.62□□□□□ -0.87
USP49-204ENST00000423567 PRPS1P60891 318 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 LTBQ06643 244 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 BSPH1Q075Z2 132 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 ST3GAL3Q11203 375 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 PIN1Q13526 163 aaPredicted RBP9.62□□□□□ -0.87
USP49-204ENST00000423567 ZNF74Q16587 644 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 DEFB113Q30KQ7 82 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 IFI44LQ53G44 452 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 C16orf89Q6UX73 402 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 TMEM108Q6UXF1 575 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 WDR88Q6ZMY6 472 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 CBLL1Q75N03 491 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 NANOGNBQ7Z5D8 188 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 PXKQ7Z7A4 578 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 CYP4Z1Q86W10 505 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 ANKS4BQ8N8V4 417 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 TMEM239Q8WW34 195 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 PRRC1Q96M27 445 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 CCL19Q99731 98 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 AMBRA1Q9C0C7 1298 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 B3GAT2Q9NPZ5 323 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 BEX4Q9NWD9 120 aaPredicted RBP9.62□□□□□ -0.87
USP49-204ENST00000423567 GMPR2Q9P2T1 348 aaKnown RBP9.62□□□□□ -0.87
USP49-204ENST00000423567 B3GAT1Q9P2W7 334 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 RIMS3Q9UJD0 308 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 ZNF229Q9UJW7 825 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 MED31Q9Y3C7 131 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 SPG11Q96JI7 2443 aa9.62□□□□□ -0.87
USP49-204ENST00000423567 ANKRD17O75179 2603 aaKnown RBP9.61□□□□□ -0.87
USP49-204ENST00000423567 TACC2O95359 2948 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 A0A1W2PR80 420 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 LRRN3E7EW58 273 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 C11orf98E9PRG8 122 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 MS4A18H0YCH9 400 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 PLPP3O14495 311 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 HS3ST1O14792 307 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 RNF13O43567 381 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 TRAF3IP2O43734 574 aaPredicted RBP9.61□□□□□ -0.87
USP49-204ENST00000423567 SMPD2O60906 423 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 UPK3AO75631 287 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 ZNF432O94892 652 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 LYPD3O95274 346 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 HPRP00739 348 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 MT-ND1P03886 318 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 THY1P04216 161 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 PAX7P23759 505 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 PTAFRP25105 342 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 ZNF83P51522 516 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 FOXG1P55316 489 aaPredicted RBP9.61□□□□□ -0.87
USP49-204ENST00000423567 UBE2NP61088 152 aaKnown RBP9.61□□□□□ -0.87
USP49-204ENST00000423567 FOXD4Q12950 439 aaPredicted RBP9.61□□□□□ -0.87
USP49-204ENST00000423567 MS4A18Q3C1V0 323 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 SAMD4BQ5PRF9 694 aaKnown RBP9.61□□□□□ -0.87
USP49-204ENST00000423567 GLYATQ6IB77 296 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 SPNS3Q6ZMD2 512 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 VTCN1Q7Z7D3 282 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms