RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ENO4A6NNW6 628 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 HNRNPCL2B2RXH8 293 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 HNRNPCL3B7ZW38 293 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 M0QYG6 137 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 FAAHO00519 579 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 SMAD9O15198 467 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 HNRNPCL1O60812 293 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 ABHD16AO95870 558 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 FESP07332 822 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 HNRNPCL4P0DMR1 293 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 TROVE2P10155 538 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 POU2F1P14859 743 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 KLK2P20151 261 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 PPIBP23284 216 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 APOBEC3AP31941 199 aaPredicted RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 UGT2B10P36537 528 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 APOBEC1P41238 236 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 HTR3AP46098 478 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 IDH2P48735 452 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 PCYT1AP49585 367 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 DIO1P49895 249 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 FAM27E3Q08E93 113 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 LARS2Q15031 903 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 DAZAP2Q15038 168 aaPredicted RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 RNPS1Q15287 305 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 EXOC3L2Q2M3D2 409 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 HSP90B2PQ58FF3 399 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 GCNT6Q5T4J0 391 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 PRAMEF8Q5VWM4 474 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 PRAMEF7Q5VXH5 474 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 CGB2Q6NT52 195 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 DLEU7Q6UYE1 221 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 FCRLAQ7L513 359 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 DHDDSQ86SQ9 333 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF440Q8IYI8 595 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 BBS10Q8TAM1 723 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 NRGNQ92686 78 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 MARS2Q96GW9 593 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 REXO5Q96IC2 774 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 DACH2Q96NX9 599 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 OR5B2Q96R09 309 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 NEU1Q99519 415 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 SLC39A3Q9BRY0 314 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 POLDIP3Q9BY77 421 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 TINAGL1Q9GZM7 467 aaPredicted RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 SMURF2Q9HAU4 748 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 CACYBPQ9HB71 228 aaKnown RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 BCL2L10Q9HD36 194 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 MED4Q9NPJ6 270 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 RASSF1Q9NS23 344 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 FGFR1OP2Q9NVK5 253 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 ELOVL5Q9NYP7 299 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 TAGLN3Q9UI15 199 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 ST6GALNAC2Q9UJ37 374 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 LEF1Q9UJU2 399 aaPredicted RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 OSGIN1Q9UJX0 560 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 CHST2Q9Y4C5 530 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 SPIN1Q9Y657 262 aaPredicted RBP6.14□□□□□ -1.43
HMGN1-205ENST00000419378 MPDZO75970 2070 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 TMED7-TICAM2A0A0A6YYA0 188 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 TMEM72A0PK05 275 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 C5orf58C9J3I9 102 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 C16orf97H3BN30 126 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ANGPT2O15123 496 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF208O43345 1280 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 TPD52L2O43399 206 aaKnown RBP6.13□□□□□ -1.43
HMGN1-205ENST00000419378 DNPH1O43598 174 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 CYTIPO60759 359 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 GOSR1O95249 250 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 PGM3O95394 542 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 VIMP08670 466 aaKnown RBP6.13□□□□□ -1.43
HMGN1-205ENST00000419378 GKN3PP0CG01 181 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 TFPIP10646 304 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 PRG2P13727 222 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 GPX2P18283 190 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 CCNA2P20248 432 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 GCSHP23434 173 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 TACR3P29371 465 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ACAA2P42765 397 aaKnown RBP6.13□□□□□ -1.43
HMGN1-205ENST00000419378 SLC1A3P43003 542 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 POLR2HP52434 150 aaKnown RBP6.13□□□□□ -1.43
HMGN1-205ENST00000419378 CSNK2A1P68400 391 aaPredicted RBP6.13□□□□□ -1.43
HMGN1-205ENST00000419378 CDK6Q00534 326 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 SF3A3Q12874 501 aaKnown RBP eCLIP6.13□□□□□ -1.436e-7■□□□□ 11.3
HMGN1-205ENST00000419378 ZSWIM7Q19AV6 140 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 RUNDC3AQ59EK9 446 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF311Q5JNZ3 666 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 METTL21CQ5VZV1 264 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ABLIM2Q6H8Q1 611 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 TFAP2EQ6VUC0 442 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 TMPPEQ6ZT21 453 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF550Q7Z398 422 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 SERPINA11Q86U17 422 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 ADGRG3Q86Y34 549 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 TUSC5Q8IXB3 177 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 SLC43A2Q8N370 569 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 CLIP4Q8N3C7 705 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 CADM2Q8N3J6 435 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 DPP10Q8N608 796 aa6.13□□□□□ -1.43
HMGN1-205ENST00000419378 NFKBIDQ8NI38 313 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms