RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NCDNQ9UBB6 729 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 HRH3Q9Y5N1 445 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 WIF1Q9Y5W5 379 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 HS3ST3B1Q9Y662 390 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 TTC28Q96AY4 2481 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 ANKRD61A6NGH8 418 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 HSPB2A8KAH6 182 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 E9PI62 339 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 PLPP3O14495 311 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CTDSP2O14595 271 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 OR2J2O76002 312 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 NUDT14O95848 222 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 RAB40ALP0C0E4 278 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CLEC2LP0C7M8 214 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CD59P13987 128 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 TGM1P22735 817 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 F8A1P23610 371 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 AVPR2P30518 371 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 GRPRP30550 384 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 TNFSF8P32971 234 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CENPAP49450 140 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SLC16A1P53985 500 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 OR12D2P58182 307 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 RPL27P61353 136 aaKnown RBP8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 E2F1Q01094 437 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 MRPL28Q13084 256 aaKnown RBP8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SNTA1Q13424 505 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 HSPB2Q16082 182 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 PLPPR5Q32ZL2 321 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SPANXN2Q5MJ10 180 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 C1QL3Q5VWW1 255 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CDCP2Q5VXM1 449 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 PLEKHG7Q6ZR37 379 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CDC20BQ86Y33 519 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 LYSMD2Q8IV50 215 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 TIGD4Q8IY51 512 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 MS4A15Q8N5U1 240 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 ADPRHL1Q8NDY3 354 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 OR2M3Q8NG83 312 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 OR2T4Q8NH00 348 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 NEIL3Q8TAT5 605 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 RHBDD1Q8TEB9 315 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 AP3S1Q92572 193 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 KIAA1143Q96AT1 154 aaPredicted RBP8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SMIM19Q96E16 107 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 PELI1Q96FA3 418 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 LIN37Q96GY3 246 aaPredicted RBP8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 RASL10BQ96S79 203 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SDHCQ99643 169 aaPredicted RBP8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CMKLR1Q99788 373 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SLC30A2Q9BRI3 323 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 TMED9Q9BVK6 235 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 DDA1Q9BW61 102 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 POTEKPQ9BYX7 375 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 ULBP3Q9BZM4 244 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SPRY4Q9C004 299 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 MIXL1Q9H2W2 232 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 TXNIPQ9H3M7 391 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SH2D2AQ9NP31 389 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 RPRD1BQ9NQG5 326 aaKnown RBP8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SDHAF3Q9NRP4 125 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 INIPQ9NRY2 104 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 SLC39A1Q9NY26 324 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 AKAP7Q9P0M2 348 aaPredicted RBP8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 GRHPRQ9UBQ7 328 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 COPS3Q9UNS2 423 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 PTRH2Q9Y3E5 179 aaKnown RBP8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CMAHPQ9Y471 501 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 FKBP7Q9Y680 259 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 V9GYH0 126 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 PCNX2A6NKB5 2137 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 CACNA1HO95180 2353 aa8.18□□□□□ -1.1
LINCMD1-201ENST00000418518 PCSK5Q92824 1860 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 A0A1W2PNV4 684 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 SHISA3A0PJX4 238 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 J3QLW9 94 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 DCTN6O00399 190 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 GPRIN2O60269 458 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 SELENOFO60613 162 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 TRIM3O75382 744 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 ABHD16AO95870 558 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 RENP00797 406 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 F13BP05160 661 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF19P17023 458 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 PTBP1P26599 531 aaKnown RBP eCLIP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 NAA10P41227 235 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 GBX2P52951 348 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 BLVRAP53004 296 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 DBPQ10586 325 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 CDC20Q12834 499 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 FOXF1Q12946 379 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF239Q16600 458 aaKnown RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 LPAL2Q16609 132 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 BTBD16Q32M84 506 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 DDI2Q5TDH0 399 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 FAM205BPQ63HN1 556 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 SLC6A19Q695T7 634 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 RPL22L1Q6P5R6 122 aaKnown RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 FAM199XQ6PEV8 388 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 PAMR1Q6UXH9 720 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms