RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 DEFB109BQ30KR1 87 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 CNPY1Q3B7I2 92 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 MS4A18Q3C1V0 323 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 LYPD4Q6UWN0 246 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 B3GNT6Q6ZMB0 384 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 FDCSPQ8NFU4 85 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 C5orf34Q96MH7 638 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 ASB6Q9NWX5 421 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 GRHPRQ9UBQ7 328 aa15.26■□□□□ 0.03
CALD1-204ENST00000417172 WARS2Q9UGM6 360 aaKnown RBP15.26■□□□□ 0.03
CALD1-204ENST00000417172 FAM171A2A8MVW0 826 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 ZNF814B7Z6K7 855 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 TRAPPC6AO75865 159 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 GDF1P27539 372 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 GSTT1P30711 240 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 B3GALT5-AS1P59052 145 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 RAB40BQ12829 278 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 KRR1Q13601 381 aaKnown RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 ACKR1Q16570 336 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 UBE2UQ5VVX9 321 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 GID4Q8IVV7 300 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 FAM83FQ8NEG4 500 aaPredicted RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 OR14L1PQ8NHC6 308 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 NMD3Q96D46 503 aaKnown RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 TEAD3Q99594 435 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 TUBA1CQ9BQE3 449 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 POTEKPQ9BYX7 375 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 ZFP64Q9NPA5 681 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 RPRD1BQ9NQG5 326 aaKnown RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 INIPQ9NRY2 104 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 MRPS18AQ9NVS2 196 aaKnown RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 KLHL21Q9UJP4 597 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 DIMT1Q9UNQ2 313 aaKnown RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 OR5H15A6NDH6 313 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 SNTNA6NMZ2 147 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 DCTN6O00399 190 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 KLK10O43240 276 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 OR6A2O95222 327 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 PAICSP22234 425 aaKnown RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 SRD5A2P31213 254 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 TLE3Q04726 772 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 MED22Q15528 200 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.25■□□□□ 0.036e-7■■■□□ 18.3
CALD1-204ENST00000417172 ANKDD1AQ495B1 522 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 WIPI1Q5MNZ9 446 aaPredicted RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 SYT6Q5T7P8 510 aaPredicted RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 BORAQ6PGQ7 559 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 GALNTL5Q7Z4T8 443 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 TMEM99Q8N816 258 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 MDS2Q8NDY4 140 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 ISOC1Q96CN7 298 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 DGCR14Q96DF8 476 aaKnown RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 ZMYND19Q96E35 227 aaPredicted RBP15.25■□□□□ 0.03
CALD1-204ENST00000417172 TBX5Q99593 518 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 FAM173AQ9BQD7 235 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 POLHQ9Y253 713 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 SLC6A5Q9Y345 797 aa15.25■□□□□ 0.03
CALD1-204ENST00000417172 APC2O95996 2303 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 ZNF407Q9C0G0 2248 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 RAMP1O60894 148 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 CELA3AP09093 270 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 HSMCR30P0CW71 290 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 OR2B6P58173 313 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 PUDPQ08623 228 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 KLHL22Q53GT1 634 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 OR2G6Q5TZ20 316 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 H1FNTQ75WM6 255 aaPredicted RBP15.24■□□□□ 0.03
CALD1-204ENST00000417172 LHFPL3Q86UP9 236 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 JAZF1Q86VZ6 243 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 OR6S1Q8NH40 331 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 FUNDC2Q9BWH2 189 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 FGF20Q9NP95 211 aaPredicted RBP15.24■□□□□ 0.03
CALD1-204ENST00000417172 CHST11Q9NPF2 352 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 RYDENQ9NUL5 291 aaKnown RBP15.24■□□□□ 0.03
CALD1-204ENST00000417172 ALKBH4Q9NXW9 302 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 NDUFA13Q9P0J0 144 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 LSM2Q9Y333 95 aaKnown RBP15.24■□□□□ 0.03
CALD1-204ENST00000417172 SPIN1Q9Y657 262 aaPredicted RBP15.24■□□□□ 0.03
CALD1-204ENST00000417172 BOD1L1Q8NFC6 3051 aa15.24■□□□□ 0.03
CALD1-204ENST00000417172 ZNF891A8MT65 544 aaPredicted RBP15.23■□□□□ 0.03
CALD1-204ENST00000417172 FAM166BA8MTA8 275 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 ARHGEF9O43307 516 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 IDH3BO43837 385 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 TXNDC12O95881 172 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 APEHP13798 732 aaKnown RBP15.23■□□□□ 0.03
CALD1-204ENST00000417172 SPI1P17947 270 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 PYCR1P32322 319 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 ATP6V1E1P36543 226 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 LIPAP38571 399 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 DIO1P49895 249 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 MAP2K6P52564 334 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 SOX8P57073 446 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 RUNX1T1Q06455 604 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 MFAP5Q13361 173 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 TIGD6Q17RP2 521 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 KCNE4Q8WWG9 221 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 NMNAT2Q9BZQ4 307 aa15.23■□□□□ 0.03
CALD1-204ENST00000417172 RSL24D1Q9UHA3 163 aaKnown RBP15.23■□□□□ 0.03
CALD1-204ENST00000417172 WASF3Q9UPY6 502 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms