RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 OPN1SWP03999 348 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 CDH12P55289 794 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 CHRNB3Q05901 458 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 SWT1Q5T5J6 900 aaKnown RBP21.81■■□□□ 1.08
HLA-C-204ENST00000415537 UEVLDQ8IX04 471 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 C10orf53Q8N6V4 93 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 ADPRHL1Q8NDY3 354 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 PIK3C3Q8NEB9 887 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 ANKK1Q8NFD2 765 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 MAGEE2Q8TD90 523 aaPredicted RBP21.81■■□□□ 1.08
HLA-C-204ENST00000415537 SLC26A7Q8TE54 656 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 SLC38A2Q96QD8 506 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 WFDC6Q9BQY6 131 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 RHNO1Q9BSD3 238 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 KAT8Q9H7Z6 458 aaKnown RBP21.81■■□□□ 1.08
HLA-C-204ENST00000415537 MOV10Q9HCE1 1003 aaKnown RBP21.81■■□□□ 1.08
HLA-C-204ENST00000415537 PMF1-BGLAPU3KQ54 211 aa21.81■■□□□ 1.08
HLA-C-204ENST00000415537 ARPC4-TTLL3A0A0A6YYG9 625 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 LOC102725191A0A1B0GVB3 256 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 RPL36A-HNRNPH2H7BZ11 118 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 M0R3H8 397 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 TPST2O60704 377 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 C8BP07358 591 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 HOXB1P14653 301 aaPredicted RBP21.8■■□□□ 1.08
HLA-C-204ENST00000415537 DUSP7Q16829 419 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 PATL1Q86TB9 770 aaKnown RBP21.8■■□□□ 1.08
HLA-C-204ENST00000415537 OR10A6Q8NH74 314 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 ARHGDIGQ99819 225 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 TMEM120AQ9BXJ8 343 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 MRGBPQ9NV56 204 aa21.8■■□□□ 1.08
HLA-C-204ENST00000415537 CR1P17927 2039 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 IGHV1-18A0A0C4DH31 117 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 INAFM1C9JVW0 142 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 MS4A18H0YCH9 400 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 FMO6PO60774 539 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 CRYAAP02489 173 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 TP53P04637 393 aaPredicted RBP21.79■■□□□ 1.08
HLA-C-204ENST00000415537 TROVE2P10155 538 aaKnown RBP eCLIP21.79■■□□□ 1.08
HLA-C-204ENST00000415537 PMS2P3Q13401 168 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 CYLC2Q14093 348 aaPredicted RBP21.79■■□□□ 1.08
HLA-C-204ENST00000415537 MS4A18Q3C1V0 323 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 INTS11Q5TA45 600 aaKnown RBP21.79■■□□□ 1.08
HLA-C-204ENST00000415537 ZNF613Q6PF04 617 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 DNM1P46Q6ZS02 220 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 SCAIQ8N9R8 606 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 SLC41A3Q96GZ6 507 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 TMEM43Q9BTV4 400 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 CRLF2Q9HC73 371 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 GPR35Q9HC97 309 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 HIVEP2P31629 2446 aa21.79■■□□□ 1.08
HLA-C-204ENST00000415537 CSPG4Q6UVK1 2322 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 BGLAPP02818 100 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 TUBA1BP68363 451 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 TUBA4AP68366 448 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 ARF1P84077 181 aaKnown RBP21.78■■□□□ 1.08
HLA-C-204ENST00000415537 MMEL1Q495T6 779 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 CLEC2AQ6UVW9 174 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 TUBA1AQ71U36 451 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 OR2M2Q96R28 347 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 KATNB1Q9BVA0 655 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 ALPK2Q86TB3 2170 aa21.78■■□□□ 1.08
HLA-C-204ENST00000415537 FN1P02751 2386 aaKnown RBP21.77■■□□□ 1.08
HLA-C-204ENST00000415537 CPSF4LA6NMK7 179 aaKnown RBP21.77■■□□□ 1.08
HLA-C-204ENST00000415537 H7C417 338 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 TRAF3IP2O43734 574 aaPredicted RBP21.77■■□□□ 1.08
HLA-C-204ENST00000415537 AHCYP23526 432 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 PCGF2P35227 344 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 DSCR9P59020 149 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 POU3F1Q03052 451 aaPredicted RBP21.77■■□□□ 1.08
HLA-C-204ENST00000415537 PUDPQ08623 228 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 CEACAM16Q2WEN9 425 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 TRMT5Q32P41 509 aaKnown RBP21.77■■□□□ 1.08
HLA-C-204ENST00000415537 C3orf36Q3SXR2 165 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 ENTPD8Q5MY95 495 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 CARD17Q5XLA6 110 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 GPR32P1Q8NGA4 272 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 OR6T1Q8NGN1 323 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 VANGL1Q8TAA9 524 aaPredicted RBP21.77■■□□□ 1.08
HLA-C-204ENST00000415537 RASSF5Q8WWW0 418 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 HTRA1Q92743 480 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 MOGAT1Q96PD6 335 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 SH3GL1Q99961 368 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 MRPL39Q9NYK5 338 aaKnown RBP21.77■■□□□ 1.08
HLA-C-204ENST00000415537 ZANQ9Y493 2812 aa21.77■■□□□ 1.08
HLA-C-204ENST00000415537 M0R3G1 203 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 CHP2O43745 196 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 MT-ATP6P00846 226 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 HLA-DOBP13765 273 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 ARFIP2P53365 341 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 VMACQ2NL98 169 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 NANOGP8Q6NSW7 305 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 FBXO17Q96EF6 278 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 EMC6Q9BV81 110 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 NELFAQ9H3P2 528 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 NANOGQ9H9S0 305 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 B3GAT2Q9NPZ5 323 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 CRNNQ9UBG3 495 aaPredicted RBP21.76■■□□□ 1.07
HLA-C-204ENST00000415537 NOX1Q9Y5S8 564 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 TLN2Q9Y4G6 2542 aa21.76■■□□□ 1.07
HLA-C-204ENST00000415537 ZNF726A6NNF4 738 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms