RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 NTSR1P30989 418 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 RPL4P36578 427 aaKnown RBP8.95□□□□□ -0.98
CD44-206ENST00000415148 ACTR1BP42025 376 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 ACTR1AP61163 376 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 BAMBIQ13145 260 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 CSRP2Q16527 193 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 NHLRC3Q5JS37 347 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 CTRB2Q6GPI1 263 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 DNM1P46Q6ZS02 220 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 FAM3CQ92520 227 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SLC25A38Q96DW6 304 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 ELMOD3Q96FG2 381 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SIPA1Q96FS4 1042 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 HSPA12BQ96MM6 686 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 GABRG3Q99928 467 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 TMPRSS13Q9BYE2 586 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 PLA2G2FQ9BZM2 168 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 LMAN2LQ9H0V9 348 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SLITRK2Q9H156 845 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SDHAF2Q9NX18 166 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 ZNF346Q9UL40 294 aaKnown RBP8.95□□□□□ -0.98
CD44-206ENST00000415148 COPS3Q9UNS2 423 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 FOXJ3Q9UPW0 622 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 MOKQ9UQ07 419 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 PCDHGA5Q9Y5G8 931 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 C2orf16Q68DN1 1984 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 hCG_1807616A0A1W2PRN6 198 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 MFSD2BA6NFX1 497 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 ACOD1A6NK06 481 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 PRR32B1ATL7 298 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 LPLP06858 475 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 GIPP09681 153 aaPredicted RBP8.95□□□□□ -0.98
CD44-206ENST00000415148 APEHP13798 732 aaKnown RBP8.95□□□□□ -0.98
CD44-206ENST00000415148 ADH7P40394 386 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 PTH2RP49190 550 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SLC25A1P53007 311 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 UBE2MP61081 183 aaKnown RBP8.95□□□□□ -0.98
CD44-206ENST00000415148 RPS4XP62701 263 aaKnown RBP8.95□□□□□ -0.98
CD44-206ENST00000415148 STX4Q12846 297 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 GXYLT1Q4G148 440 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SLC25A25Q6KCM7 469 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 PWWP2BQ6NUJ5 590 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 KIRREL2Q6UWL6 708 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 ALKAL2Q6UX46 152 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 FCRLAQ7L513 359 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 PRSS41Q7RTY9 318 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SPRED2Q7Z698 418 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 ZNF440Q8IYI8 595 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 ZNF614Q8N883 585 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 OR6M1Q8NGM8 313 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 LIPHQ8WWY8 451 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 MIB2Q96AX9 1013 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 HAVCR1Q96D42 359 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 NOX3Q9HBY0 568 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 C2orf42Q9NWW7 574 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 MGAT4CQ9UBM8 478 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SLC6A5Q9Y345 797 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 TRBV23OR9-2A0A075B6M9 112 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 A0A0J9YY10 115 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 PLSCR5A0PG75 271 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 BLACEA4D250 179 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 OR6C68A6NDL8 312 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ACOT7O00154 380 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 OR10H2O60403 315 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 KHDRBS3O75525 346 aaKnown RBP8.94□□□□□ -0.98
CD44-206ENST00000415148 ZNF432O94892 652 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 OR2A4O95047 310 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 IGKV1D-16P01601 117 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 TMIGD3P0DMS9 266 aaPredicted RBP8.94□□□□□ -0.98
CD44-206ENST00000415148 DCTDP32321 178 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ART1P52961 327 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 RAP2BP61225 183 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 GPR18Q14330 331 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 LINC00303Q3SY05 128 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ZC3H14Q6PJT7 736 aaKnown RBP8.94□□□□□ -0.98
CD44-206ENST00000415148 LRRN1Q6UXK5 716 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 APOOLQ6UXV4 268 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 SLC16A9Q7RTY1 509 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 RD3Q7Z3Z2 195 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 CSNK1A1LQ8N752 337 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 OR5T3Q8NGG3 340 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 OR10G6Q8NH81 332 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 MOSPD2Q8NHP6 518 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 CCL4L1Q8NHW4 92 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ZPLD1Q8TCW7 415 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 OIT3Q8WWZ8 545 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 BADQ92934 168 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 TSACCQ96A04 125 aaPredicted RBP8.94□□□□□ -0.98
CD44-206ENST00000415148 OR2A7Q96R45 310 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 NMNAT3Q96T66 252 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 LIN7BQ9HAP6 207 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 WBP1LQ9NX94 342 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ALPK2Q86TB3 2170 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 SLC22A23A1A5C7 686 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 H3BSH0 61 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 GNB5O14775 395 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 SELENOFO60613 162 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 NMBP08949 121 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 GRPRP30550 384 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 P2RX1P51575 399 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms