RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 UBTFL6P0CB48 400 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-208ENST00000414711 FKBP2P26885 142 aaKnown RBP13.39□□□□□ -0.27
CPNE1-208ENST00000414711 CCL8P80075 99 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 ZNF154Q13106 437 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 PDCD1Q15116 288 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 PAQR6Q6TCH4 344 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 C9orf139Q6ZV77 190 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 MDP1Q86V88 176 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 METTL6Q8TCB7 284 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 C7orf26Q96N11 449 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 LEF1Q9UJU2 399 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-208ENST00000414711 FZR1Q9UM11 496 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 RNF114Q9Y508 228 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 SOX21Q9Y651 276 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-208ENST00000414711 IGHV1-69-2A0A0G2JMI3 117 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 TRAF3IP2O43734 574 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 SHOX2O60902 331 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 FOXH1O75593 365 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 LYPLA1O75608 230 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 CHEK2O96017 543 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 FGF4P08620 206 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 UROSP10746 265 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 CCNA2P20248 432 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 GLRXP35754 106 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 SELENOPP49908 381 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 RPS23P62266 143 aaKnown RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 ALKBH6Q3KRA9 238 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 GLIPR1L2Q4G1C9 344 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 RUSC1-AS1Q66K80 236 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 FIP1L1Q6UN15 594 aaKnown RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 GRINAQ7Z429 371 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 LSRQ86X29 649 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 ZNF563Q8TA94 476 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 ST7LQ8TDW4 575 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 GTF3AQ92664 365 aaKnown RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 FAM120BQ96EK7 910 aaKnown RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 KTI12Q96EK9 354 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 MRI1Q9BV20 369 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 SF3B5Q9BWJ5 86 aaKnown RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 MMP26Q9NRE1 261 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 ZCCHC3Q9NUD5 404 aaKnown RBP13.38□□□□□ -0.27
CPNE1-208ENST00000414711 ASH2LQ9UBL3 628 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 SEC14L4Q9UDX3 406 aa13.38□□□□□ -0.27
CPNE1-208ENST00000414711 C5orf63A6NC05 138 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 AZIN1O14977 448 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 RSL1D1O76021 490 aaKnown RBP13.37□□□□□ -0.27
CPNE1-208ENST00000414711 CSTAP01040 98 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 IMPDH2P12268 514 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 ARRB2P32121 409 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 CRYBB2P43320 205 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 RPL14P50914 215 aaKnown RBP13.37□□□□□ -0.27
CPNE1-208ENST00000414711 GYS2P54840 703 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 ROR2Q01974 943 aaKnown RBP13.37□□□□□ -0.27
CPNE1-208ENST00000414711 TEKQ02763 1124 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 NKPD1Q17RQ9 610 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 ZNF385BQ569K4 471 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 GPAT4Q86UL3 456 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 RAB1CQ92928 201 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 EGLN2Q96KS0 407 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 SORT1Q99523 831 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 SLC30A2Q9BRI3 323 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 C20orf27Q9GZN8 174 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 TNFRSF19Q9NS68 423 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 UBAP1Q9NZ09 502 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 DUSP13Q9UII6 198 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 HAO1Q9UJM8 370 aa13.37□□□□□ -0.27
CPNE1-208ENST00000414711 IGHV3OR16-10A0A075B7F0 116 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 ISPDA4D126 451 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 SRRM5B3KS81 715 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 UPK3AO75631 287 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 CLPXO76031 633 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 VIMP08670 466 aaKnown RBP13.36□□□□□ -0.27
CPNE1-208ENST00000414711 CSF1P09603 554 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 FRKP42685 505 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-208ENST00000414711 CAPZA2P47755 286 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 GNGT1P63211 74 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 ARF1P84077 181 aaKnown RBP13.36□□□□□ -0.27
CPNE1-208ENST00000414711 PCGF3Q3KNV8 242 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 GKAP1Q5VSY0 366 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-208ENST00000414711 KANK2Q63ZY3 851 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 PARP8Q8N3A8 854 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 ZNF781Q8N8C0 355 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 AGR3Q8TD06 166 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 PPCDCQ96CD2 204 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 ZNF764Q96H86 408 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-208ENST00000414711 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 SERHL2Q9H4I8 314 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 PIF1Q9H611 641 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 PCDHGB4Q9UN71 923 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 CACNG2Q9Y698 323 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 KCNE3Q9Y6H6 103 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 COL7A1Q02388 2944 aa13.36□□□□□ -0.27
CPNE1-208ENST00000414711 CENPVL1A0A0U1RR11 272 aa13.35□□□□□ -0.27
CPNE1-208ENST00000414711 C17orf100A8MU93 164 aa13.35□□□□□ -0.27
CPNE1-208ENST00000414711 TMEM229AB2RXF0 380 aa13.35□□□□□ -0.27
CPNE1-208ENST00000414711 EDF1O60869 148 aaKnown RBP13.35□□□□□ -0.27
CPNE1-208ENST00000414711 IGHMP01871 453 aa13.35□□□□□ -0.27
CPNE1-208ENST00000414711 ZNF12P17014 697 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms