RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ALKBH3Q96Q83 286 aaPredicted RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 HOPXQ9BPY8 73 aaPredicted RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 TMUB1Q9BVT8 246 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 LINC00470Q9BZP3 86 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 AMBRA1Q9C0C7 1298 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 ALG2Q9H553 416 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 SLC17A5Q9NRA2 495 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 FAIMQ9NVQ4 179 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 CISD1Q9NZ45 108 aaKnown RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 NPAP1Q9NZP6 1156 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 USP22Q9UPT9 525 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 ACANP16112 2415 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 LOC102725191A0A1B0GVB3 256 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 GMNCA6NCL1 334 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 ZNF726A6NNF4 738 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 MS4A18H0YCH9 400 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 KPNA4O00629 521 aaPredicted RBP9.83□□□□□ -0.84
RFFL-204ENST00000414419 NDUFAB1O14561 156 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 FZD7O75084 574 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 UPK3AO75631 287 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 ADORA3P0DMS8 318 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 UMPSP11172 480 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 PAX7P23759 505 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 CD40P25942 277 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 KDELR2P33947 212 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 NUDT2P50583 147 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 CDH11P55287 796 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 SH3BGRP55822 239 aaPredicted RBP9.83□□□□□ -0.84
RFFL-204ENST00000414419 ROR2Q01974 943 aaKnown RBP9.83□□□□□ -0.84
RFFL-204ENST00000414419 POU3F1Q03052 451 aaPredicted RBP9.83□□□□□ -0.84
RFFL-204ENST00000414419 LTBQ06643 244 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 LGALS3BPQ08380 585 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 PUDPQ08623 228 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 MS4A18Q3C1V0 323 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 HIKESHIQ53FT3 197 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 CYBRD1Q53TN4 286 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 SEZ6L2Q6UXD5 910 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 LINC00114Q6XXX2 140 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 WDR31Q8NA23 367 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 OR4D11Q8NGI4 311 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 OR1K1Q8NGR3 316 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 OR5J2Q8NH18 312 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 LILRB1Q8NHL6 650 aaPredicted RBP9.83□□□□□ -0.84
RFFL-204ENST00000414419 NEUROG1Q92886 237 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 TRMT61AQ96FX7 289 aaKnown RBP9.83□□□□□ -0.84
RFFL-204ENST00000414419 SLC41A3Q96GZ6 507 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 MOGAT1Q96PD6 335 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 KCNS3Q9BQ31 491 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 SLC19A3Q9BZV2 496 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 PCDHAC1Q9H158 963 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 OBP2BQ9NPH6 170 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 B3GAT2Q9NPZ5 323 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 NANSQ9NR45 359 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 MRPL39Q9NYK5 338 aaKnown RBP9.83□□□□□ -0.84
RFFL-204ENST00000414419 B3GAT1Q9P2W7 334 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 NOX1Q9Y5S8 564 aa9.83□□□□□ -0.84
RFFL-204ENST00000414419 FLNAP21333 2647 aaKnown RBP9.82□□□□□ -0.84
RFFL-204ENST00000414419 LRRN3E7EW58 273 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 PLPP3O14495 311 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 SERPINI2O75830 405 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 ZNF432O94892 652 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 CH25HO95992 272 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 HLA-DOBP13765 273 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 FOSL1P15407 271 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 TNFRSF1BP20333 461 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 LSP1P33241 339 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 OR1E2P47887 323 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 PTH2RP49190 550 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 CRYBA2P53672 197 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 ATP5J2P56134 94 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 GNGT1P63211 74 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 SELENOWP63302 87 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 LIPEQ05469 1076 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 TBRG1Q3YBR2 411 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 CARD17Q5XLA6 110 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 ANKRD16Q6P6B7 361 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 PRSS57Q6UWY2 283 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 YTHDF3Q7Z739 585 aaKnown RBP9.82□□□□□ -0.84
RFFL-204ENST00000414419 PXKQ7Z7A4 578 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 SLC15A3Q8IY34 581 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 ANKK1Q8NFD2 765 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 GSX2Q9BZM3 304 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 POLR2J2Q9GZM3 115 aaKnown RBP9.82□□□□□ -0.84
RFFL-204ENST00000414419 POLR2J3Q9H1A7 115 aaKnown RBP9.82□□□□□ -0.84
RFFL-204ENST00000414419 FKRPQ9H9S5 495 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 CRLF2Q9HC73 371 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 CMTM6Q9NX76 183 aa9.82□□□□□ -0.84
RFFL-204ENST00000414419 A0A096LPE4 126 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 A0A1W2PPZ6 126 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 SLC35F4A4IF30 521 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 SHISA9B4DS77 424 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 C11orf98E9PRG8 122 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 RPL36A-HNRNPH2H7BZ11 118 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 M0R3G1 203 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 CXCR6O00574 342 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 RNF13O43567 381 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 TRAF3IP2O43734 574 aaPredicted RBP9.81□□□□□ -0.84
RFFL-204ENST00000414419 SNX3O60493 162 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 SHOX2O60902 331 aaPredicted RBP9.81□□□□□ -0.84
RFFL-204ENST00000414419 OR5F1O95221 314 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms