RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TPSD1Q9BZJ3 242 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 MED17Q9NVC6 651 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 NDUFB11Q9NX14 153 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 RDH8Q9NYR8 311 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 CYB5R1Q9UHQ9 305 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 ASB1Q9Y576 335 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 OR1A2Q9Y585 309 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 ZDBF2Q9HCK1 2354 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TRBV5-4A0A0C4DH59 114 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 A0A1W2PR77 199 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 NPIPA2E9PIF3 369 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 INMT-MINDY4F8WBC2 141 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 GDF9O60383 454 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 FCMRO60667 390 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 CDRT1O95170 752 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 GHRHP01286 108 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 FCER2P06734 321 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 DCNP07585 359 aaKnown RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 HOXD4P09016 255 aaPredicted RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 FAM157BP0CG42 384 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 PNMTP11086 282 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 BCKDHAP12694 445 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 ZNF250P15622 560 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 PRPS1L1P21108 318 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 PAICSP22234 425 aaKnown RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 MSX1P28360 303 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 GSTM5P46439 218 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 ADPRHP54922 357 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 REEP5Q00765 189 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 MLLT11Q13015 90 aaPredicted RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 SPHARQ15513 63 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 ANKRD55Q3KP44 614 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 FAM46CQ5VWP2 391 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 PAQR7Q86WK9 346 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 RBFAQ8N0V3 343 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 LILRA3Q8N6C8 439 aaPredicted RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 OR2L3Q8NG85 312 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 VANGL1Q8TAA9 524 aaPredicted RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 FAM110DQ8TAY7 271 aaPredicted RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 EEF1AKMT1Q8WVE0 214 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 KCNJ9Q92806 393 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 MTERF3Q96E29 417 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TRMT61AQ96FX7 289 aaKnown RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 RAB1BQ9H0U4 201 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TMEM231Q9H6L2 316 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 GCM1Q9NP62 436 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 SEC14L3Q9UDX4 400 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 ASB4Q9Y574 426 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3DA0A087WVF3 549 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3IA0A087WXS9 549 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3EA0A087X179 549 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3KA0A087X1G2 549 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3FA6NER0 549 aaPredicted RBP8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3LB9A6J9 549 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 SGK494L7N484 410 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 CLIC1O00299 241 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 SLC31A1O15431 190 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ATG13O75143 517 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 PSIP1O75475 530 aaKnown RBP8.59□□□□□ -1.03
SNHG3-201ENST00000413987 SLC25A14O95258 325 aaPredicted RBP8.59□□□□□ -1.03
SNHG3-201ENST00000413987 WDPCPO95876 746 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 AMY1AP04745 511 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 OR4E1P0C645 316 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3HP0C7X1 549 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 RRASP10301 218 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ENGP17813 658 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 DNASE1P24855 282 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TPMTP51580 245 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 CEBPGP53567 150 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 CTSCP53634 463 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ACTBP60709 375 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ACTA2P62736 377 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ACTG1P63261 375 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ACTG2P63267 376 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ACTC1P68032 377 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ACTA1P68133 377 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 CSTF1Q05048 431 aaKnown RBP8.59□□□□□ -1.03
SNHG3-201ENST00000413987 DUOXA1Q1HG43 343 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 MICAQ29983 383 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 RAET1LQ5VY80 246 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3GQ6DHY5 549 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3CQ6IPX1 549 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 TBC1D3Q8IZP1 549 aaPredicted RBP8.59□□□□□ -1.03
SNHG3-201ENST00000413987 SLC34A3Q8N130 599 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 Q8N402 240 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 SLC5A8Q8N695 610 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 OR13C3Q8NGS6 347 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 CD200R1Q8TD46 325 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 RFT1Q96AA3 541 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 SPSB1Q96BD6 273 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 SORCS2Q96PQ0 1159 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 COPS8Q99627 209 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 DOHHQ9BU89 302 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 SLC29A3Q9BZD2 475 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 MED28Q9H204 178 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 EPHX3Q9H6B9 360 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 PARPBPQ9NWS1 579 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 NLKQ9UBE8 527 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 PLEKHB1Q9UF11 243 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms