RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 IFT52Q9Y366 437 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 THSD7BQ9C0I4 1608 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 SYNRGQ9UMZ2 1314 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 MYH10P35580 1976 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 IGLV3-22A0A075B6J6 115 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 A0A0J9YXY3 114 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 E7ESA3 106 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 G3V4G9 280 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 BTN3A3O00478 584 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 POLR2DO15514 142 aaKnown RBP2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 SUPT7LO94864 414 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 SNAPINO95295 136 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 NDUFB10O96000 172 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 CA1P00915 261 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 IFNB1P01574 187 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 PRPHP41219 470 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 HSD17B7P56937 341 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 MYL5Q02045 173 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 PJVKQ0ZLH3 352 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 TCP10Q12799 353 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 CUL1Q13616 776 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZCWPW2Q504Y3 356 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 HSP90AA5PQ58FG0 334 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 CASC10Q5T4H9 136 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 CCDC137Q6PK04 289 aaKnown RBP2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 SASS6Q6UVJ0 657 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 IGFL2Q6UWQ7 119 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 KIAA1328Q86T90 577 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 GPATCH11Q8N954 259 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 GMCL1P1Q8NEA9 526 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 OR5L2Q8NGL0 311 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 NEIL3Q8TAT5 605 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 TCTEX1D2Q8WW35 142 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 PAGE5Q96GU1 130 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 C7orf34Q96L11 122 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 C16orf45Q96MC5 204 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 NAP1L5Q96NT1 182 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 CCNL2Q96S94 520 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 KLHDC3Q9BQ90 382 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZNF670Q9BS34 389 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 TMEM117Q9H0C3 514 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 RHBGQ9H310 441 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 TDRD3Q9H7E2 651 aaKnown RBP2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 LIN28AQ9H9Z2 209 aaKnown RBP2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 SIGLEC8Q9NYZ4 499 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 BTNL2Q9UIR0 455 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 LAMP5Q9UJQ1 280 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 OR10H1Q9Y4A9 318 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 UGT2A1Q9Y4X1 527 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 MAD1L1Q9Y6D9 718 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 PATJQ8NI35 1801 aa2.49□□□□□ -2.01
HMGB1P11-201ENST00000413899 A0A0G2JRQ6 117 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 CLRN2A0PK11 232 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 ABCD4O14678 606 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 ANGPT2O15123 496 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 SMPD2O60906 423 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 BCAS1O75363 584 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 IGHG4P01861 327 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZNF17P17021 662 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 DRD5P21918 477 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 CD1BP29016 333 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 YWHABP31946 246 aaKnown RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 LONP1P36776 959 aaKnown RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 HPCAL1P37235 193 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 RBMXP38159 391 aaKnown RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 APOC4P55056 127 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 SNAP25P60880 206 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 CNTN2Q02246 1040 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 MXD4Q14582 209 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 ARL6IP1Q15041 203 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 SYPL1Q16563 259 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 KLF17Q5JT82 389 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 C11orf71Q6IPW1 123 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 GALNT17Q6IS24 598 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 ACOT7LQ6ZUV0 252 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 TMEM179Q6ZVK1 233 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 VSTM4Q8IW00 320 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 LRRC8AQ8IWT6 810 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 MKXQ8IYA7 352 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 MTURNQ8N3F0 131 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 CCDC148Q8NFR7 591 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 FBXO30Q8TB52 745 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 ACER1Q8TDN7 264 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 RPL3LQ92901 407 aaKnown RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 RIT2Q99578 217 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 LZTS2Q9BRK4 669 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 NIPSNAP3BQ9BS92 247 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 DEFB129Q9H1M3 183 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 BLZF1Q9H2G9 400 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 FARSBQ9NSD9 589 aaKnown RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 SAMSN1Q9NSI8 373 aaKnown RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 SLC35D1Q9NTN3 355 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 IFNKQ9P0W0 207 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 NEUROG3Q9Y4Z2 214 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZNF638Q14966 1978 aaKnown RBP2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 TRIP11Q15643 1979 aa2.48□□□□□ -2.01
HMGB1P11-201ENST00000413899 COL4A4P53420 1690 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 ASTN1O14525 1302 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 CASP8AP2Q9UKL3 1982 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms