RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 OR4M2Q8NGB6 313 aa15.93■□□□□ 0.14
PHRF1-202ENST00000413872 CCL4L1Q8NHW4 92 aa15.93■□□□□ 0.14
PHRF1-202ENST00000413872 GLYATL2Q8WU03 294 aa15.93■□□□□ 0.14
PHRF1-202ENST00000413872 GATA6Q92908 595 aa15.93■□□□□ 0.14
PHRF1-202ENST00000413872 AGAP4Q96P64 663 aa15.93■□□□□ 0.14
PHRF1-202ENST00000413872 THAP7Q9BT49 309 aaPredicted RBP15.93■□□□□ 0.14
PHRF1-202ENST00000413872 NUP50Q9UKX7 468 aa15.93■□□□□ 0.14
PHRF1-202ENST00000413872 TK1P04183 234 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 Q499Y3 187 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 ST8SIA1Q92185 356 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 ZNF775Q96BV0 537 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-202ENST00000413872 SARAFQ96BY9 339 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 ZC3H10Q96K80 434 aaKnown RBP15.92■□□□□ 0.14
PHRF1-202ENST00000413872 AMBRA1Q9C0C7 1298 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 NRSN2Q9GZP1 204 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 MAN2C1Q9NTJ4 1040 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 CD300AQ9UGN4 299 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 PPT2Q9UMR5 302 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 PRRG2O14669 202 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 TSSK4Q6SA08 328 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 CFAP77Q6ZQR2 320 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 PGAP1Q75T13 922 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 KLHDC8BQ8IXV7 354 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 OR1S1Q8NH92 325 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 SUN5Q8TC36 379 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 LAT2Q9GZY6 243 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 RLIMQ9NVW2 624 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 USP22Q9UPT9 525 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 B3GALT1Q9Y5Z6 326 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 TMPRSS11DO60235 418 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 NME1P15531 152 aaKnown RBP15.92■□□□□ 0.14
PHRF1-202ENST00000413872 CCDC58Q4VC31 144 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 EXOSC6Q5RKV6 272 aaKnown RBP15.92■□□□□ 0.14
PHRF1-202ENST00000413872 PSORS1C1Q9UIG5 152 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 NDRG4Q9ULP0 352 aaKnown RBP15.92■□□□□ 0.14
PHRF1-202ENST00000413872 PPIL1Q9Y3C6 166 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 IGHV3-20A0A0C4DH32 117 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 PRAMEF27A3QJZ7 478 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 SLC22A5O76082 557 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 DRD5P21918 477 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 SELENBP1Q13228 472 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 WDR88Q6ZMY6 472 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 DPY19L4Q7Z388 723 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 KCNG3Q8TAE7 436 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 LRFN5Q96NI6 719 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 CSF3RQ99062 836 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 CMSS1Q9BQ75 279 aaKnown RBP15.92■□□□□ 0.14
PHRF1-202ENST00000413872 FAIMQ9NVQ4 179 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 EDARQ9UNE0 448 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 YBX2Q9Y2T7 364 aaKnown RBP15.92■□□□□ 0.14
PHRF1-202ENST00000413872 OR51B4Q9Y5P0 310 aa15.92■□□□□ 0.14
PHRF1-202ENST00000413872 A0A087WUU8 490 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 ARGFXA6NJG6 315 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 CD300LBA8K4G0 201 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 RNF212BA8MTL3 300 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 SEC14L2O76054 403 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 ASTLQ6HA08 431 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-202ENST00000413872 SULF2Q8IWU5 870 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 OR2A1Q8NGT9 310 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 CD300LFQ8TDQ1 290 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 CCDC74BQ96LY2 380 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 MUTYHQ9UIF7 546 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 H7C1C5 153 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 ACOT8O14734 319 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 SLC16A6O15403 523 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 GLCEO94923 617 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 LCN6P62502 163 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 DUSP8Q13202 625 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 PLK5Q496M5 336 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 METAP1DQ6UB28 335 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-202ENST00000413872 MENTQ9BUN1 341 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 PBDC1Q9BVG4 233 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 CNTRLQ7Z7A1 2325 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 MCRIP1C9JLW8 97 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 MBTPS2O43462 519 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 ALDOBP05062 364 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 RPL27P61353 136 aaKnown RBP15.91■□□□□ 0.14
PHRF1-202ENST00000413872 RPS23P62266 143 aaKnown RBP15.91■□□□□ 0.14
PHRF1-202ENST00000413872 SLC15A4Q8N697 577 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 FNDC9Q8TBE3 224 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 NT5CQ8TCD5 201 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 UBQLN3Q9H347 655 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 PMS2P1A4D2B8 440 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 UPK1BO75841 260 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 S100A2P29034 98 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 GAB1Q13480 694 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 TBC1D28Q2M2D7 210 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 HLA-BQ31612 363 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 BCORP1Q8N888 145 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 OR2B2Q9GZK3 357 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 HMX3A6NHT5 357 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 A8MV72 311 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-202ENST00000413872 MKRN2OSH3BPM6 223 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 MEN1O00255 615 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 TNFSF15O95150 251 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 GABRA2P47869 451 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 UBE2NLQ5JXB2 153 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 UBE2UQ5VVX9 321 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 DLEU7Q6UYE1 221 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 Q6ZS52 159 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms