RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 FNDC11Q9BVV2 318 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CST9LQ9H4G1 147 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 B3GAT1Q9P2W7 334 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 EXOSC1Q9Y3B2 195 aaKnown RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 A0A1B0GUH1 482 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 F6UZH7 168 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SH3BGRLO75368 114 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SLC25A12O75746 678 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 KCNK5O95279 499 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ASGR2P07307 311 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 HKR1P10072 659 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CHRNB4P30926 498 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TTPAP49638 278 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ZNF84P51523 738 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CDKN2DP55273 166 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 WNT3P56703 355 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CARD16Q5EG05 197 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2T5Q6IEZ7 315 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CNIH2Q6PI25 160 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 DHRS11Q6UWP2 260 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 NRROSQ86YC3 692 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 FAM126BQ8IXS8 530 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 COLGALT1Q8NBJ5 622 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2T29Q8NH02 315 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TWIST2Q8WVJ9 160 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PINX1Q96BK5 328 aaKnown RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 RPUSD4Q96CM3 377 aaKnown RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 SLC41A3Q96GZ6 507 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 AKR1E2Q96JD6 320 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TP53RKQ96S44 253 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ABHD1Q96SE0 405 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 UTP23Q9BRU9 249 aaKnown RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 TEX101Q9BY14 249 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 WWTR1Q9GZV5 400 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TUBB1Q9H4B7 451 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 WDCPQ9H6R7 721 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 RNF150Q9ULK6 438 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CAMK2AQ9UQM7 478 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 KCNK6Q9Y257 313 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TRIP11Q15643 1979 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CLEC18AA5D8T8 446 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ARRDC5A6NEK1 342 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 AGAP14A8MT82 685 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MAGEB17A8MXT2 336 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 LANCL1O43813 399 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CDC40O60508 579 aaKnown RBP eCLIP4.8□□□□□ -1.64
HERC4-205ENST00000412272 PRAF2O60831 178 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MMP23AO75900 390 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2A4O95047 310 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TGFB1P01137 390 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TCRBP04435 133 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 GIPP09681 153 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 ARSAP15289 507 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ZNF37AP17032 561 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 GYG1P46976 350 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 RIPPLY3P57055 190 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 HTR4Q13639 388 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TNFAIP1Q13829 316 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 GAB4Q2WGN9 574 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ZNF789Q5FWF6 425 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 NCBP2-AS2Q69YL0 99 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2A2Q6IF42 318 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CLEC18BQ6UXF7 455 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PID1Q7Z2X4 250 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 C4orf19Q8IY42 314 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CLEC18CQ8NCF0 446 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR51A7Q8NH64 312 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 M1APQ8TC57 530 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MRPS31Q92665 395 aaKnown RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 UBE2FQ969M7 185 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 NTNG2Q96CW9 530 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MOCOSQ96EN8 888 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 POM121L2Q96KW2 1035 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SLC46A1Q96NT5 459 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2A7Q96R45 310 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 NRIP2Q9BQI9 281 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2J1Q9GZK6 312 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SLITRK2Q9H156 845 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 RBM22Q9NW64 420 aaKnown RBP eCLIP4.8□□□□□ -1.64
HERC4-205ENST00000412272 ASIC5Q9NY37 505 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ZNF226Q9NYT6 803 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 V9GYS6 101 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 IGHV2-70DA0A0C4DH43 119 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SEPT4O43236 478 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CTSVO60911 334 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CPEP16870 476 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 IDSP22304 550 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PRKACGP22612 351 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TPBGQ13641 420 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TMEM249Q2WGJ8 235 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TTLL9Q3SXZ7 439 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PDZD11Q5EBL8 140 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PTCRAQ6ISU1 281 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 RGMBQ6NW40 437 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ZNF613Q6PF04 617 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PRSS55Q6UWB4 352 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 HEPN1Q6WQI6 88 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 FCRLAQ7L513 359 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2W3Q7Z3T1 314 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 GOLGA7Q7Z5G4 137 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms