RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ZNF57Q68EA5 555 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-204ENST00000412061 OR52E8Q6IFG1 317 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 FAM53AQ6NSI3 398 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-204ENST00000412061 CERS6Q6ZMG9 384 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 FRA10AC1Q70Z53 315 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 ARCQ7LC44 396 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 APRG1Q8IVJ8 170 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 NKAIN4Q8IVV8 208 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 SLC39A11Q8N1S5 342 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 OR10G7Q8NGN6 311 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 SPPL2AQ8TCT8 520 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 NEIL2Q969S2 332 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 TBX15Q96SF7 602 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 PELOQ9BRX2 385 aaKnown RBP3.7□□□□□ -1.82
BRCA1-204ENST00000412061 TMEM59Q9BXS4 323 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF385DQ9H6B1 395 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 MS4A12Q9NXJ0 267 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 EURLQ9NYK6 297 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 ABCD2Q9UBJ2 740 aa3.7□□□□□ -1.82
BRCA1-204ENST00000412061 WARS2Q9UGM6 360 aaKnown RBP3.7□□□□□ -1.82
BRCA1-204ENST00000412061 SBNO1A3KN83 1393 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 UNC13AQ9UPW8 1703 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 NOTCH4Q99466 2003 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 TRABD2BA6NFA1 517 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 SLCO1B7G3V0H7 640 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 K7EQD1 137 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 TFECO14948 347 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-204ENST00000412061 SCN2BO60939 215 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 NXPH4O95158 308 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 LCA5LO95447 670 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 CLIC3O95833 236 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 FGGP02679 453 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 DCNP07585 359 aaKnown RBP3.69□□□□□ -1.82
BRCA1-204ENST00000412061 NPR2P20594 1047 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 IL32P24001 234 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 UGT1A3P35503 534 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ACVR1BP36896 505 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 OPRL1P41146 370 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 NBL1P41271 181 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ATP4BP51164 291 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF33AQ06730 810 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 PMS2P3Q13401 168 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 PSG3Q16557 428 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 UPP1Q16831 310 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 PTPN20Q4JDL3 420 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 PAGE2BQ5JRK9 111 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 FFAR4Q5NUL3 377 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 SAMD4BQ5PRF9 694 aaKnown RBP3.69□□□□□ -1.82
BRCA1-204ENST00000412061 MEDAGQ5VYS4 303 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 C3P1Q6ZMU1 363 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF621Q6ZSS3 439 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ZBED8Q8IZ13 594 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 LIX1Q8N485 282 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF491Q8N8L2 437 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 DNAAF3Q8N9W5 541 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 OR7G1Q8NGA0 311 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 OR2T6Q8NHC8 308 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 SLC7A13Q8TCU3 470 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 C11orf52Q96A22 123 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 NABP1Q96AH0 204 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ECHDC3Q96DC8 303 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 PGLYRP2Q96PD5 576 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 MS4A4EQ96PG1 132 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF300Q96RE9 604 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-204ENST00000412061 F2RL3Q96RI0 385 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 HSD17B14Q9BPX1 270 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 RBM4BQ9BQ04 359 aaKnown RBP3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ECSITQ9BQ95 431 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 MAP1LC3CQ9BXW4 147 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 NAA50Q9GZZ1 169 aaKnown RBP3.69□□□□□ -1.82
BRCA1-204ENST00000412061 OPN3Q9H1Y3 402 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-204ENST00000412061 SP140LQ9H930 580 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ANKHQ9HCJ1 492 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF446Q9NWS9 450 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 KIF25Q9UIL4 384 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 MGAT4AQ9UM21 535 aa3.69□□□□□ -1.82
BRCA1-204ENST00000412061 FER1L5A0AVI2 2057 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 TCF20Q9UGU0 1960 aaKnown RBP3.68□□□□□ -1.82
BRCA1-204ENST00000412061 TEX48A0A1B0GUV7 120 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 CENPXA8MT69 81 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 ERVV-2B6SEH9 535 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 UGT1A9O60656 530 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 NOL4O94818 638 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 IGHV3-9P01782 118 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 PATE4P0C8F1 98 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 IL12AP29459 219 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 CD40LGP29965 261 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 FOXN2P32314 431 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 BLVRAP53004 296 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 UCNP55089 124 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 GSCP56915 257 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-204ENST00000412061 FBXW4P57775 412 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 GPX6P59796 221 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 PAX2Q02962 417 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 PUDPQ08623 228 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 GABRA6Q16445 453 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 MOGAT2Q3SYC2 334 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF876PQ49A33 203 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 SPESP1Q6UW49 350 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 LCLAT1Q6UWP7 414 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms