RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SYNPRQ8TBG9 265 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 MRAPQ8TCY5 172 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 SFXN5Q8TD22 340 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 C11orf40Q8WZ69 217 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR5P2Q8WZ92 322 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCL17Q92583 94 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 PPP1R14AQ96A00 147 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRIM44Q96DX7 344 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCDC126Q96EE4 140 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ELMOD3Q96FG2 381 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 MS4A3Q96HJ5 214 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM71F1Q96KD3 344 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TSSK3Q96PN8 268 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM237Q96Q45 408 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR7D2Q96RA2 312 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 KCNA7Q96RP8 456 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 DIRC2Q96SL1 478 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 PRPF18Q99633 342 aaKnown RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 NAPGQ99747 312 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF350Q9GZX5 532 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 RASSF4Q9H2L5 321 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 NELFAQ9H3P2 528 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 DENND2DQ9H6A0 471 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 SAP30LQ9HAJ7 183 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TCF7L1Q9HCS4 588 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 NOX4Q9NPH5 578 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 EXOSC3Q9NQT5 275 aaKnown RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 MMP26Q9NRE1 261 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 POLE3Q9NRF9 147 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 SIRT3Q9NTG7 399 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 EXD2Q9NVH0 621 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ATAD3AQ9NVI7 634 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPATCH2Q9NW75 528 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 C1orf109Q9NX04 203 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ADPRHL2Q9NX46 363 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 B3GNT2Q9NY97 397 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 UBAP1Q9NZ09 502 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 C1RLQ9NZP8 487 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TAAR3PQ9P1P4 343 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 MYEF2Q9P2K5 600 aaKnown RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ASH2LQ9UBL3 628 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR5V1Q9UGF6 321 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC7A8Q9UHI5 535 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 BAIAP2L1Q9UHR4 511 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ATP6V1HQ9UI12 483 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 KCNE5Q9UJ90 142 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 OSGIN1Q9UJX0 560 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 PRDM4Q9UKN5 801 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 FBXL3Q9UKT7 428 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 FZR1Q9UM11 496 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 RASD1Q9Y272 281 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 POLR3KQ9Y2Y1 108 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 UTP11Q9Y3A2 253 aaKnown RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMED5Q9Y3A6 229 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 WDR45Q9Y484 360 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCL27Q9Y4X3 112 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 RNF114Q9Y508 228 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 INSIG2Q9Y5U4 225 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 NUP214P35658 2090 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV3OR16-10A0A075B7F0 116 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 A0A096LPI6 279 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRAV40A0A0B4J280 105 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 PLSCR5A0PG75 271 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CFAP73A6NFT4 308 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLDN24A6NM45 220 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 A8MVM7 634 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 A8MXK9 166 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF99A8MXY4 864 aaPredicted RBP2□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM114B3SHH9 223 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 G3V4G9 280 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRAPPC2LH3BP13 241 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 M0R3G1 203 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAAHO00519 579 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 AP3D1O14617 1153 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CFLARO15519 480 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZSCAN12O43309 604 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 SPRY3O43610 288 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 AKAP8O43823 692 aaKnown RBP2□□□□□ -2.09
RNU4-53P-201ENST00000410828 PIP5K1CO60331 668 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 ENTPD5O75356 428 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 BCAS1O75363 584 aaPredicted RBP2□□□□□ -2.09
RNU4-53P-201ENST00000410828 LYPLA1O75608 230 aaPredicted RBP2□□□□□ -2.09
RNU4-53P-201ENST00000410828 UBOX5O94941 541 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 UBL3O95164 117 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 AHSA1O95433 338 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 TSPAN15O95858 294 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLPTM1O96005 669 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CHEK2O96017 543 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 PLATP00750 562 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 PRB2P02812 416 aaPredicted RBP2□□□□□ -2.09
RNU4-53P-201ENST00000410828 OPN1MWP04001 364 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 SERPINA5P05154 406 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 LCKP06239 509 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 SNRPAP09012 282 aaKnown RBP2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CSF1P09603 554 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 TFPTP0C1Z6 253 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 SBK2P0C263 348 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM157BP0CG42 384 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 OPN1MW2P0DN77 364 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms