RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SLC27A4Q6P1M0 643 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM71Q6P5X7 295 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 WDR74Q6RFH5 385 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FAM198BQ6UWH4 519 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 MBOAT1Q6ZNC8 495 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SH2D5Q6ZV89 423 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 GDPD3Q7L5L3 318 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 LUZP2Q86TE4 346 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 TBC1D26Q86UD7 250 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ZC3HC1Q86WB0 502 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 AMIGO1Q86WK6 493 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 OOSP2Q86WS3 158 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 DCUN1D3Q8IWE4 304 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 OFCC1Q8IZS5 231 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 AMER3Q8N944 861 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 LINC01555Q8NAE3 123 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 BPIFCQ8NFQ6 507 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 DMBX1Q8NFW5 382 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 OR14K1Q8NGZ2 314 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 WDR36Q8NI36 951 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 DYNC2LI1Q8TCX1 351 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 CTHRC1Q96CG8 243 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SLC25A36Q96CQ1 311 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SLC41A3Q96GZ6 507 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ELMO2Q96JJ3 720 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 PPP3R2Q96LZ3 170 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 GPR137Q96N19 417 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FCRL4Q96PJ5 515 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 LMF1Q96S06 567 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 GPHA2Q96T91 129 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 DDOQ99489 341 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 MAP3K3Q99759 626 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 CPNE1Q99829 537 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 PAPOLGQ9BWT3 736 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 STRADBQ9C0K7 418 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ROGDIQ9GZN7 287 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 NAA50Q9GZZ1 169 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 RACGAP1Q9H0H5 632 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SRMSQ9H3Y6 488 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ESRP2Q9H6T0 727 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FN3KRPQ9HA64 309 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 APMAPQ9HDC9 416 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 MKKSQ9NPJ1 570 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ASCL3Q9NQ33 180 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 YAE1D1Q9NRH1 226 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 PLSCR3Q9NRY6 295 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 HRASLS2Q9NWW9 162 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 PTTG3PQ9NZH4 202 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FOXJ2Q9P0K8 574 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 MGAT4CQ9UBM8 478 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 NDRG3Q9UGV2 375 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 IL20RAQ9UHF4 553 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF229Q9UJW7 825 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 IKZF3Q9UKT9 509 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 POMT2Q9UKY4 750 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 RNF150Q9ULK6 438 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FOXA2Q9Y261 457 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 LSM4Q9Y4Z0 139 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 HEBP2Q9Y5Z4 205 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SLC22A7Q9Y694 548 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 COLEC10Q9Y6Z7 277 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 KNTC1P50748 2209 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ANKRD11Q6UB99 2663 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 A0A0G2JND7 137 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PIPSLA2A3N6 862 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 NPEPPSL1A6NEC2 478 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TLCD2A6NGC4 264 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 FAM159BA6NKW6 160 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 DUXAA6NLW8 204 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 COPEO14579 308 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ACOT8O14734 319 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF208O43345 1280 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 HOXA3O43365 443 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 HCRTR1O43613 425 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 WBP4O75554 376 aaKnown RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 OR6A2O95222 327 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 C1orf105O95561 183 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 LGI1O95970 557 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 C9P02748 559 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SERPINA5P05154 406 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 CHRM5P08912 532 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 RBP1P09455 135 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 OR8G3PP0DMU2 310 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SAGP10523 405 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 COX5BP10606 129 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 FCGR2AP12318 317 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 FOLR1P15328 257 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ST6GAL1P15907 406 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SPNP16150 400 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 CBR1P16152 277 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 UGT2B7P16662 529 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PAICSP22234 425 aaKnown RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 GCSHP23434 173 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ITGA3P26006 1051 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 RBMS1P29558 406 aaKnown RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 GABRA5P31644 462 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 NPBWR1P48145 328 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 AGTR2P50052 363 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ANXA11P50995 505 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms