RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ZNF585AQ6P3V2 769 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 CHMP1BQ7LBR1 199 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 CYB561A3Q8NBI2 242 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 OR4K13Q8NH42 304 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 B3GALT5Q9Y2C3 310 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 LRRC42Q9Y546 428 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 TEX13CA0A0J9YWL9 993 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 AQP7P3A6NL99 342 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 SLC16A6O15403 523 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 PRKYO43930 277 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 IFNGR1P15260 489 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 SLC6A6P31641 620 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 HSPA13P48723 471 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 MFSD13AQ14CX5 517 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 ACKR1Q16570 336 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 ZNF239Q16600 458 aaKnown RBP11.24□□□□□ -0.61
PMS1-204ENST00000409823 TTC23Q5W5X9 447 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 ZNF324BQ6AW86 544 aaPredicted RBP11.24□□□□□ -0.61
PMS1-204ENST00000409823 CASP12Q6UXS9 341 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 TCEANCQ8N8B7 351 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 CNIH3Q8TBE1 160 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 TSPAN32Q96QS1 320 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 PRRG4Q9BZD6 226 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 IMPAD1Q9NX62 359 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 ENOPH1Q9UHY7 261 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 RAB26Q9ULW5 256 aa11.24□□□□□ -0.61
PMS1-204ENST00000409823 AQP7O14520 342 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 TLX2O43763 284 aaPredicted RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 TGM6O95932 706 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 TPOP07202 933 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 HIST1H1CP16403 213 aaKnown RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 GGT2P36268 569 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 RUNX1T1Q06455 604 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 GTF3C1Q12789 2109 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 CHERPQ8IWX8 916 aaKnown RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 SCAIQ8N9R8 606 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 SDR9C7Q8NEX9 313 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 NRIP3Q9NQ35 241 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 TIGARQ9NQ88 270 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 INIPQ9NRY2 104 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 UBAP1Q9NZ09 502 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 SH3BGRL2Q9UJC5 107 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 ZNF346Q9UL40 294 aaKnown RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 ZGRF1Q86YA3 2104 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 A0A1B0GVC2 190 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 HTR3EA5X5Y0 456 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 CLCA1A8K7I4 914 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 EIF1BO60739 113 aaKnown RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 SMNDC1O75940 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
PMS1-204ENST00000409823 CPN1P15169 458 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 PTGS2P35354 604 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 RPS3AP61247 264 aaKnown RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 C1DQ13901 141 aaKnown RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 EEF1A1P5Q5VTE0 462 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 ZNF691Q5VV52 312 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 DPY19L2P2Q6ZN68 376 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 FCRLAQ7L513 359 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 ENTHD1Q8IYW4 607 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 LSM14AQ8ND56 463 aaKnown RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 OR52E2Q8NGJ4 325 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 OR6S1Q8NH40 331 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 ZPLD1Q8TCW7 415 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 CPNE4Q96A23 557 aaPredicted RBP11.23□□□□□ -0.61
PMS1-204ENST00000409823 SARAFQ96BY9 339 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 TRIB1Q96RU8 372 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 NMNAT3Q96T66 252 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 MED20Q9H944 212 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 GRHPRQ9UBQ7 328 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 RNF6Q9Y252 685 aa11.23□□□□□ -0.61
PMS1-204ENST00000409823 H0YAE9 185 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 CD14P08571 375 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 TSPAN19P0C672 248 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 ZNF43P17038 809 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 TDGF1P3P51864 188 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 CDC42P60953 191 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 BCL2A1Q16548 175 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 SMN1Q16637 294 aaKnown RBP11.22□□□□□ -0.61
PMS1-204ENST00000409823 PDSS1Q5T2R2 415 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 SLX4IPQ5VYV7 408 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 CARD17Q5XLA6 110 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 RPL13AP3Q6NVV1 102 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 PTCHD4Q6ZW05 846 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 C8orf59Q8N0T1 100 aaPredicted RBP11.22□□□□□ -0.61
PMS1-204ENST00000409823 LNX2Q8N448 690 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 SYT14Q8NB59 555 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 ZHX1-C8orf76Q96EF9 292 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 ZNF385AQ96PM9 386 aaKnown RBP11.22□□□□□ -0.61
PMS1-204ENST00000409823 ANKRD60Q9BZ19 345 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 FN3KQ9H479 309 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 AMBNQ9NP70 447 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 GYPBP06028 91 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 AGFG1P52594 562 aaKnown RBP11.22□□□□□ -0.61
PMS1-204ENST00000409823 MED21Q13503 144 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 KEAP1Q14145 624 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 EMC4Q5J8M3 183 aa11.22□□□□□ -0.61
PMS1-204ENST00000409823 USP51Q70EK9 711 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms