RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 DESI1Q6ICB0 168 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 DPPA4Q7L190 304 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 SLC35G3Q8N808 338 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 ZFPM2Q8WW38 1151 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 PARP12Q9H0J9 701 aaKnown RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 R3HDMLQ9H3Y0 253 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 NXT1Q9UKK6 140 aaKnown RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 PROCRQ9UNN8 238 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 TMEM72A0PK05 275 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 TM4SF4P48230 202 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 RPS16P62249 146 aaKnown RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF45Q02386 682 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 C17orf67Q0P5P2 114 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CYP1B1Q16678 543 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 DPY19L2P1Q6NXN4 242 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ERMP1Q7Z2K6 904 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 PM20D2Q8IYS1 436 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 LILRA2Q8N149 483 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 TCTEX1D2Q8WW35 142 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 C11orf40Q8WZ69 217 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 APH1AQ96BI3 265 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CCDC74BQ96LY2 380 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 COQ4Q9Y3A0 265 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ADGRB1O14514 1584 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 HTR2AP28223 471 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CLINT1Q14677 625 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SCD5Q86SK9 330 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 THNSL2Q86YJ6 484 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 PIANPQ8IYJ0 282 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OR10K1Q8NGX5 313 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 UBL7Q96S82 380 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 TUBB1Q9H4B7 451 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CD320Q9NPF0 282 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OR6C65A6NJZ3 312 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF814B7Z6K7 855 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 BLVRBP30043 206 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 HLCSP50747 726 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OR14A16Q8NHC5 309 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ANKRD9Q96BM1 317 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 FGGYQ96C11 551 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 METTL9Q9H1A3 318 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 GPR173Q9NS66 373 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 B3GALNT1O75752 331 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 RASAL1O95294 804 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 IGHV3-13P01766 116 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 IGHV3-7P01780 117 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 TFP02787 698 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 MAKP20794 623 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CLDN8P56748 225 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 FLI1Q01543 452 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CTSL3PQ5NE16 218 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SUMF2Q8NBJ7 301 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ATF6BQ99941 703 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SLC12A9Q9BXP2 914 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 NMNAT2Q9BZQ4 307 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 AMBRA1Q9C0C7 1298 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 PPA2Q9H2U2 334 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CASP8AP2Q9UKL3 1982 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CKAP5Q14008 2032 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CDK2AP1O14519 115 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 LEXMQ3ZCV2 418 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 PLXDC2Q6UX71 529 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CMIPQ8IY22 773 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OR5K2Q8NHB8 316 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 RNF128Q8TEB7 428 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 FAXDC2Q96IV6 333 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 RIMS4Q9H426 269 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 BANF2Q9H503 90 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF286AQ9HBT8 521 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 HEYLQ9NQ87 328 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 PHF1O43189 567 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 C19orf48Q6RUI8 117 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 FBXL14Q8N1E6 418 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OR8J3Q8NGG0 315 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SLC37A2Q8TED4 501 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ZNRF4Q8WWF5 429 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SIGLEC10Q96LC7 697 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OR5M11Q96RB7 305 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SAP130Q9H0E3 1048 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 POMT1Q9Y6A1 747 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 PIK3C2AO00443 1686 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OR2W5A6NFC9 320 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SPINT2O43291 252 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 LILRA3Q8N6C8 439 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 SORCS2Q96PQ0 1159 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 S1PR3Q99500 378 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OSBPL7Q9BZF2 842 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 OR51B4Q9Y5P0 310 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CTRB1P17538 263 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF83P51522 516 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 ELLP55199 621 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 PCBP3P57721 371 aaKnown RBP7.79□□□□□ -1.16
SCN9A-203ENST00000409672 TUBA1BP68363 451 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 TUBA4AP68366 448 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 GALEQ14376 348 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 CTRB2Q6GPI1 263 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 HTR3DQ70Z44 454 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 TUBA1AQ71U36 451 aa7.79□□□□□ -1.16
SCN9A-203ENST00000409672 VN1R2Q8NFZ6 395 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms